Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
PTP4A1Q93096 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.3■□□□□ 0.36
PTP4A1Q93096 AC009113.1-201ENST00000570267 2443 ntBASIC17.3■□□□□ 0.36
PTP4A1Q93096 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PTP4A1Q93096 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.3■□□□□ 0.36
PTP4A1Q93096 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.29■□□□□ 0.36
PTP4A1Q93096 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A1Q93096 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.29■□□□□ 0.36
PTP4A1Q93096 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A1Q93096 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A1Q93096 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A1Q93096 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PTP4A1Q93096 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.29■□□□□ 0.36
PTP4A1Q93096 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
PTP4A1Q93096 RPS2P52-201ENST00000469610 820 ntBASIC17.29■□□□□ 0.36
PTP4A1Q93096 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.29■□□□□ 0.36
PTP4A1Q93096 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.29■□□□□ 0.36
PTP4A1Q93096 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.29■□□□□ 0.36
PTP4A1Q93096 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A1Q93096 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
PTP4A1Q93096 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
PTP4A1Q93096 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A1Q93096 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A1Q93096 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A1Q93096 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PTP4A1Q93096 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A1Q93096 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PTP4A1Q93096 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.29■□□□□ 0.36
PTP4A1Q93096 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTP4A1Q93096 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A1Q93096 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A1Q93096 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.28■□□□□ 0.36
PTP4A1Q93096 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.28■□□□□ 0.36
PTP4A1Q93096 AL031598.1-201ENST00000561511 1773 ntBASIC17.28■□□□□ 0.36
PTP4A1Q93096 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.28■□□□□ 0.36
PTP4A1Q93096 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.28■□□□□ 0.36
PTP4A1Q93096 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A1Q93096 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PTP4A1Q93096 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A1Q93096 AC069152.1-201ENST00000438030 544 ntBASIC17.28■□□□□ 0.36
PTP4A1Q93096 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.28■□□□□ 0.36
PTP4A1Q93096 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.28■□□□□ 0.36
PTP4A1Q93096 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.28■□□□□ 0.36
PTP4A1Q93096 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.28■□□□□ 0.36
PTP4A1Q93096 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
PTP4A1Q93096 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.28■□□□□ 0.36
PTP4A1Q93096 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.28■□□□□ 0.36
PTP4A1Q93096 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.28■□□□□ 0.36
PTP4A1Q93096 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.28■□□□□ 0.36
PTP4A1Q93096 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A1Q93096 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.28■□□□□ 0.36
PTP4A1Q93096 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A1Q93096 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A1Q93096 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PTP4A1Q93096 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A1Q93096 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A1Q93096 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A1Q93096 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTP4A1Q93096 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.27■□□□□ 0.36
PTP4A1Q93096 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A1Q93096 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.27■□□□□ 0.36
PTP4A1Q93096 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A1Q93096 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A1Q93096 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.27■□□□□ 0.36
PTP4A1Q93096 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A1Q93096 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A1Q93096 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A1Q93096 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PTP4A1Q93096 AC007613.1-201ENST00000572811 2597 ntBASIC17.27■□□□□ 0.36
PTP4A1Q93096 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A1Q93096 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.27■□□□□ 0.36
PTP4A1Q93096 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A1Q93096 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PTP4A1Q93096 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A1Q93096 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
PTP4A1Q93096 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A1Q93096 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTP4A1Q93096 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
PTP4A1Q93096 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.27■□□□□ 0.36
PTP4A1Q93096 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTP4A1Q93096 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.27■□□□□ 0.35
PTP4A1Q93096 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.27■□□□□ 0.35
PTP4A1Q93096 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
PTP4A1Q93096 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTP4A1Q93096 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.27■□□□□ 0.35
PTP4A1Q93096 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.27■□□□□ 0.35
PTP4A1Q93096 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTP4A1Q93096 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PTP4A1Q93096 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A1Q93096 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A1Q93096 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A1Q93096 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A1Q93096 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A1Q93096 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.26■□□□□ 0.35
PTP4A1Q93096 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PTP4A1Q93096 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.26■□□□□ 0.35
PTP4A1Q93096 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A1Q93096 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PTP4A1Q93096 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PTP4A1Q93096 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms