Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
SPTSSBQ8NFR3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC10.58□□□□□ -0.71
SPTSSBQ8NFR3 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 RAP2CP1-202ENST00000605179 643 ntBASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
SPTSSBQ8NFR3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 AC092850.2-201ENST00000623821 2697 ntBASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
SPTSSBQ8NFR3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 NID2-208ENST00000617139 3827 ntTSL 5 BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
SPTSSBQ8NFR3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms