Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 KRT8P20-201ENST00000423953 1409 ntBASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 SLC7A5P2-201ENST00000553010 536 ntBASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 OR6D1P-202ENST00000641007 5290 ntBASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CCDC197Q8NCU1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 IRX1P1-201ENST00000438849 1838 ntBASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 AC009053.2-201ENST00000563701 2365 ntBASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 TSPY26P-201ENST00000476365 1326 ntBASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 AC243732.1-201ENST00000612648 864 ntBASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 ESPNP-201ENST00000270691 2015 ntBASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CCDC197Q8NCU1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 AC097381.1-201ENST00000429019 1296 ntBASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CCDC197Q8NCU1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC197Q8NCU1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.09■□□□□ 0.65
CCDC197Q8NCU1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC197Q8NCU1 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CCDC197Q8NCU1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC197Q8NCU1 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC197Q8NCU1 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.09■□□□□ 0.65
CCDC197Q8NCU1 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC197Q8NCU1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC197Q8NCU1 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
CCDC197Q8NCU1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms