Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 RNA5SP413-201ENST00000516373 109 ntBASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 AC141586.3-201ENST00000562166 1838 ntBASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LINC00346Q8IVM7 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 AC093503.3-201ENST00000624917 2352 ntBASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 ID1-201ENST00000376105 1233 ntBASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 TUBB8P6-201ENST00000436895 1288 ntBASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 KRT18P16-201ENST00000510337 1294 ntBASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 UNC93B5-201ENST00000530315 699 ntBASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LINC00346Q8IVM7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 POM121L13P-201ENST00000422362 380 ntBASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LINC00346Q8IVM7 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.02■□□□□ 0.32
LINC00346Q8IVM7 AC008403.3-201ENST00000598924 454 ntBASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms