Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CRLF3Q8IUI8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CRLF3Q8IUI8 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CRLF3Q8IUI8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.23■□□□□ 0.67
CRLF3Q8IUI8 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CRLF3Q8IUI8 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
CRLF3Q8IUI8 AC006333.2-201ENST00000607957 2099 ntBASIC19.23■□□□□ 0.67
CRLF3Q8IUI8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CRLF3Q8IUI8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
CRLF3Q8IUI8 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CRLF3Q8IUI8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CRLF3Q8IUI8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 BX276092.2-201ENST00000417668 665 ntBASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 AC073210.2-201ENST00000430369 194 ntBASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 KRT18P6-201ENST00000555540 1265 ntBASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 AC104581.1-202ENST00000635932 2618 ntBASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CRLF3Q8IUI8 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 CD99P1-205ENST00000527459 561 ntBASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.21■□□□□ 0.67
CRLF3Q8IUI8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 AC010980.2-201ENST00000587099 1412 ntBASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 AC009113.1-201ENST00000570267 2443 ntBASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CRLF3Q8IUI8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CRLF3Q8IUI8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms