Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.33■□□□□ 0.69
PACS2Q86VP3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PACS2Q86VP3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PACS2Q86VP3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
PACS2Q86VP3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PACS2Q86VP3 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PACS2Q86VP3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PACS2Q86VP3 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PACS2Q86VP3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PACS2Q86VP3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.33■□□□□ 0.68
PACS2Q86VP3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
PACS2Q86VP3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PACS2Q86VP3 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PACS2Q86VP3 AC010141.2-201ENST00000452426 721 ntBASIC19.33■□□□□ 0.68
PACS2Q86VP3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.33■□□□□ 0.68
PACS2Q86VP3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PACS2Q86VP3 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.33■□□□□ 0.68
PACS2Q86VP3 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.33■□□□□ 0.68
PACS2Q86VP3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PACS2Q86VP3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PACS2Q86VP3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
PACS2Q86VP3 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PACS2Q86VP3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PACS2Q86VP3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PACS2Q86VP3 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
PACS2Q86VP3 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
PACS2Q86VP3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PACS2Q86VP3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PACS2Q86VP3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
PACS2Q86VP3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PACS2Q86VP3 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PACS2Q86VP3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PACS2Q86VP3 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
PACS2Q86VP3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PACS2Q86VP3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PACS2Q86VP3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.32■□□□□ 0.68
PACS2Q86VP3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PACS2Q86VP3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PACS2Q86VP3 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PACS2Q86VP3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PACS2Q86VP3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PACS2Q86VP3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PACS2Q86VP3 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.32■□□□□ 0.68
PACS2Q86VP3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.32■□□□□ 0.68
PACS2Q86VP3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.32■□□□□ 0.68
PACS2Q86VP3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.32■□□□□ 0.68
PACS2Q86VP3 KRT18P20-201ENST00000548986 1279 ntBASIC19.32■□□□□ 0.68
PACS2Q86VP3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.32■□□□□ 0.68
PACS2Q86VP3 AC008175.2-201ENST00000612840 297 ntBASIC19.32■□□□□ 0.68
PACS2Q86VP3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.32■□□□□ 0.68
PACS2Q86VP3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PACS2Q86VP3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PACS2Q86VP3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PACS2Q86VP3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PACS2Q86VP3 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PACS2Q86VP3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PACS2Q86VP3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
PACS2Q86VP3 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PACS2Q86VP3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PACS2Q86VP3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS2Q86VP3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS2Q86VP3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS2Q86VP3 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS2Q86VP3 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS2Q86VP3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PACS2Q86VP3 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS2Q86VP3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS2Q86VP3 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PACS2Q86VP3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
PACS2Q86VP3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PACS2Q86VP3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.31■□□□□ 0.68
PACS2Q86VP3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PACS2Q86VP3 BID-214ENST00000617586 542 ntTSL 5 BASIC19.31■□□□□ 0.68
PACS2Q86VP3 AC120498.10-201ENST00000621827 505 ntBASIC19.31■□□□□ 0.68
PACS2Q86VP3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.31■□□□□ 0.68
PACS2Q86VP3 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS2Q86VP3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS2Q86VP3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
PACS2Q86VP3 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PACS2Q86VP3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.31■□□□□ 0.68
PACS2Q86VP3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS2Q86VP3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS2Q86VP3 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
PACS2Q86VP3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS2Q86VP3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PACS2Q86VP3 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PACS2Q86VP3 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PACS2Q86VP3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PACS2Q86VP3 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC19.3■□□□□ 0.68
PACS2Q86VP3 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PACS2Q86VP3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PACS2Q86VP3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PACS2Q86VP3 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
PACS2Q86VP3 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PACS2Q86VP3 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PACS2Q86VP3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.3■□□□□ 0.68
PACS2Q86VP3 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.3■□□□□ 0.68
PACS2Q86VP3 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.3■□□□□ 0.68
PACS2Q86VP3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.3■□□□□ 0.68
PACS2Q86VP3 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms