Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 AC097488.1-201ENST00000507834 756 ntBASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
LRRTM4Q86VH4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 FITM1-202ENST00000559294 800 ntBASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 SLC25A1P4-201ENST00000567977 778 ntBASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 AL158211.5-201ENST00000623583 2518 ntBASIC18.92■□□□□ 0.62
LRRTM4Q86VH4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 AC087499.1-201ENST00000418141 1075 ntBASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 AL390955.1-201ENST00000428694 934 ntBASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 AP005242.2-201ENST00000580065 1175 ntBASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 SDHAP1-207ENST00000440850 2000 ntBASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.91■□□□□ 0.62
LRRTM4Q86VH4 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 CRYGFP-201ENST00000418459 633 ntBASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
LRRTM4Q86VH4 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
LRRTM4Q86VH4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.89■□□□□ 0.61
LRRTM4Q86VH4 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms