Protein–RNA interactions for Protein: Q7Z614

SNX20, Sorting nexin-20, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20Q7Z614 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNX20Q7Z614 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SNX20Q7Z614 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX20Q7Z614 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNX20Q7Z614 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.15■□□□□ 0.66
SNX20Q7Z614 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX20Q7Z614 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
SNX20Q7Z614 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX20Q7Z614 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.15■□□□□ 0.66
SNX20Q7Z614 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SNX20Q7Z614 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.15■□□□□ 0.66
SNX20Q7Z614 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.15■□□□□ 0.66
SNX20Q7Z614 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.15■□□□□ 0.66
SNX20Q7Z614 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX20Q7Z614 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX20Q7Z614 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SNX20Q7Z614 KRT16P1-201ENST00000399124 1418 ntBASIC19.15■□□□□ 0.66
SNX20Q7Z614 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SNX20Q7Z614 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SNX20Q7Z614 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SNX20Q7Z614 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
SNX20Q7Z614 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.14■□□□□ 0.66
SNX20Q7Z614 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SNX20Q7Z614 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX20Q7Z614 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX20Q7Z614 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX20Q7Z614 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SNX20Q7Z614 RPS2P55-201ENST00000397318 883 ntBASIC19.14■□□□□ 0.65
SNX20Q7Z614 AC012618.2-201ENST00000428058 849 ntBASIC19.14■□□□□ 0.65
SNX20Q7Z614 AC004980.1-204ENST00000429707 299 ntBASIC19.14■□□□□ 0.65
SNX20Q7Z614 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.14■□□□□ 0.65
SNX20Q7Z614 AC107956.1-201ENST00000494359 873 ntBASIC19.14■□□□□ 0.65
SNX20Q7Z614 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.14■□□□□ 0.65
SNX20Q7Z614 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.14■□□□□ 0.65
SNX20Q7Z614 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.14■□□□□ 0.65
SNX20Q7Z614 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
SNX20Q7Z614 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.14■□□□□ 0.65
SNX20Q7Z614 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX20Q7Z614 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.14■□□□□ 0.65
SNX20Q7Z614 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX20Q7Z614 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SNX20Q7Z614 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX20Q7Z614 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.13■□□□□ 0.65
SNX20Q7Z614 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.13■□□□□ 0.65
SNX20Q7Z614 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
SNX20Q7Z614 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX20Q7Z614 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.13■□□□□ 0.65
SNX20Q7Z614 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SNX20Q7Z614 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.13■□□□□ 0.65
SNX20Q7Z614 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX20Q7Z614 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNX20Q7Z614 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX20Q7Z614 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.13■□□□□ 0.65
SNX20Q7Z614 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SNX20Q7Z614 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.13■□□□□ 0.65
SNX20Q7Z614 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.13■□□□□ 0.65
SNX20Q7Z614 AP001412.1-201ENST00000608405 714 ntBASIC19.13■□□□□ 0.65
SNX20Q7Z614 CR392000.1-201ENST00000624770 1228 ntBASIC19.13■□□□□ 0.65
SNX20Q7Z614 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX20Q7Z614 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.13■□□□□ 0.65
SNX20Q7Z614 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX20Q7Z614 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX20Q7Z614 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX20Q7Z614 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX20Q7Z614 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.13■□□□□ 0.65
SNX20Q7Z614 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX20Q7Z614 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.13■□□□□ 0.65
SNX20Q7Z614 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.13■□□□□ 0.65
SNX20Q7Z614 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SNX20Q7Z614 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.13■□□□□ 0.65
SNX20Q7Z614 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
SNX20Q7Z614 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX20Q7Z614 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX20Q7Z614 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.12■□□□□ 0.65
SNX20Q7Z614 TEX21P-204ENST00000641479 1693 ntBASIC19.12■□□□□ 0.65
SNX20Q7Z614 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX20Q7Z614 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX20Q7Z614 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNX20Q7Z614 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX20Q7Z614 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.12■□□□□ 0.65
SNX20Q7Z614 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.12■□□□□ 0.65
SNX20Q7Z614 Z85996.1-201ENST00000494644 937 ntBASIC19.12■□□□□ 0.65
SNX20Q7Z614 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.12■□□□□ 0.65
SNX20Q7Z614 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.12■□□□□ 0.65
SNX20Q7Z614 AC233702.5-201ENST00000584107 538 ntBASIC19.12■□□□□ 0.65
SNX20Q7Z614 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.12■□□□□ 0.65
SNX20Q7Z614 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.12■□□□□ 0.65
SNX20Q7Z614 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
SNX20Q7Z614 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
SNX20Q7Z614 AC141586.3-201ENST00000562166 1838 ntBASIC19.11■□□□□ 0.65
SNX20Q7Z614 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNX20Q7Z614 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX20Q7Z614 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX20Q7Z614 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX20Q7Z614 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNX20Q7Z614 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX20Q7Z614 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.11■□□□□ 0.65
SNX20Q7Z614 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
SNX20Q7Z614 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
SNX20Q7Z614 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms