Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
COPS6Q7L5N1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COPS6Q7L5N1 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COPS6Q7L5N1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COPS6Q7L5N1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COPS6Q7L5N1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
COPS6Q7L5N1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
COPS6Q7L5N1 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
COPS6Q7L5N1 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC24.36■■□□□ 1.49
COPS6Q7L5N1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC24.36■■□□□ 1.49
COPS6Q7L5N1 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC24.36■■□□□ 1.49
COPS6Q7L5N1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC24.36■■□□□ 1.49
COPS6Q7L5N1 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
COPS6Q7L5N1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
COPS6Q7L5N1 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC24.36■■□□□ 1.49
COPS6Q7L5N1 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC24.36■■□□□ 1.49
COPS6Q7L5N1 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COPS6Q7L5N1 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC24.35■■□□□ 1.49
COPS6Q7L5N1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
COPS6Q7L5N1 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COPS6Q7L5N1 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
COPS6Q7L5N1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC24.35■■□□□ 1.49
COPS6Q7L5N1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COPS6Q7L5N1 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC24.35■■□□□ 1.49
COPS6Q7L5N1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COPS6Q7L5N1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
COPS6Q7L5N1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC24.35■■□□□ 1.49
COPS6Q7L5N1 AC063952.2-201ENST00000498792 1227 ntBASIC24.35■■□□□ 1.49
COPS6Q7L5N1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC24.35■■□□□ 1.49
COPS6Q7L5N1 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC24.35■■□□□ 1.49
COPS6Q7L5N1 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC24.35■■□□□ 1.49
COPS6Q7L5N1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
COPS6Q7L5N1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
COPS6Q7L5N1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COPS6Q7L5N1 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COPS6Q7L5N1 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
COPS6Q7L5N1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 YBX1P2-201ENST00000489612 999 ntBASIC24.34■■□□□ 1.49
COPS6Q7L5N1 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 PWWP2AP1-201ENST00000429776 2273 ntBASIC24.34■■□□□ 1.49
COPS6Q7L5N1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
COPS6Q7L5N1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC24.33■■□□□ 1.49
COPS6Q7L5N1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC24.33■■□□□ 1.49
COPS6Q7L5N1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
COPS6Q7L5N1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
COPS6Q7L5N1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC24.33■■□□□ 1.49
COPS6Q7L5N1 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
COPS6Q7L5N1 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC24.33■■□□□ 1.49
COPS6Q7L5N1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
COPS6Q7L5N1 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.49
COPS6Q7L5N1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC24.33■■□□□ 1.49
COPS6Q7L5N1 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
COPS6Q7L5N1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC24.33■■□□□ 1.49
COPS6Q7L5N1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC24.33■■□□□ 1.49
COPS6Q7L5N1 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC24.33■■□□□ 1.49
COPS6Q7L5N1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
COPS6Q7L5N1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.48
COPS6Q7L5N1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
COPS6Q7L5N1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
COPS6Q7L5N1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
COPS6Q7L5N1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COPS6Q7L5N1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COPS6Q7L5N1 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
COPS6Q7L5N1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COPS6Q7L5N1 AC125437.2-201ENST00000625180 2167 ntBASIC24.32■■□□□ 1.48
COPS6Q7L5N1 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COPS6Q7L5N1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC24.32■■□□□ 1.48
COPS6Q7L5N1 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COPS6Q7L5N1 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COPS6Q7L5N1 TSPY23P-201ENST00000440136 739 ntBASIC24.32■■□□□ 1.48
COPS6Q7L5N1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC24.32■■□□□ 1.48
COPS6Q7L5N1 COX11P1-201ENST00000489116 835 ntBASIC24.32■■□□□ 1.48
COPS6Q7L5N1 AC022616.7-201ENST00000525383 220 ntBASIC24.32■■□□□ 1.48
COPS6Q7L5N1 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COPS6Q7L5N1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC24.32■■□□□ 1.48
COPS6Q7L5N1 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC24.32■■□□□ 1.48
COPS6Q7L5N1 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
COPS6Q7L5N1 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC24.32■■□□□ 1.48
COPS6Q7L5N1 KRT8P45-201ENST00000414328 1447 ntBASIC24.32■■□□□ 1.48
COPS6Q7L5N1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
COPS6Q7L5N1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms