Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 REXO1L12P-201ENST00000622156 912 ntBASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RFWD3Q6PCD5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 LINC01465-201ENST00000408887 1940 ntBASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 BX088651.1-201ENST00000540551 451 ntBASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.08■□□□□ 0.81
RFWD3Q6PCD5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.08■□□□□ 0.8
RFWD3Q6PCD5 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFWD3Q6PCD5 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.08■□□□□ 0.8
RFWD3Q6PCD5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFWD3Q6PCD5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFWD3Q6PCD5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.08■□□□□ 0.8
RFWD3Q6PCD5 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.08■□□□□ 0.8
RFWD3Q6PCD5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RFWD3Q6PCD5 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.08■□□□□ 0.8
RFWD3Q6PCD5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RFWD3Q6PCD5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 AC004980.1-204ENST00000429707 299 ntBASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 AL031985.4-201ENST00000642138 673 ntBASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 AP000974.1-201ENST00000623909 2387 ntBASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RFWD3Q6PCD5 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFWD3Q6PCD5 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFWD3Q6PCD5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.05■□□□□ 0.8
RFWD3Q6PCD5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.05■□□□□ 0.8
RFWD3Q6PCD5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
RFWD3Q6PCD5 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFWD3Q6PCD5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFWD3Q6PCD5 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RFWD3Q6PCD5 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RFWD3Q6PCD5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.05■□□□□ 0.8
RFWD3Q6PCD5 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.05■□□□□ 0.8
RFWD3Q6PCD5 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.05■□□□□ 0.8
RFWD3Q6PCD5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.05■□□□□ 0.8
RFWD3Q6PCD5 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms