Protein–RNA interactions for Protein: Q6PCB7

SLC27A1, Long-chain fatty acid transport protein 1, humanhuman

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A1Q6PCB7 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC27A1Q6PCB7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC27A1Q6PCB7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC27A1Q6PCB7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC27A1Q6PCB7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC27A1Q6PCB7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC27A1Q6PCB7 TREX1-205ENST00000625293 1783 ntBASIC20.88■□□□□ 0.93
SLC27A1Q6PCB7 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC27A1Q6PCB7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.88■□□□□ 0.93
SLC27A1Q6PCB7 PCDHAC2-203ENST00000615316 3011 ntBASIC20.88■□□□□ 0.93
SLC27A1Q6PCB7 HMGA1P5-201ENST00000412453 271 ntBASIC20.88■□□□□ 0.93
SLC27A1Q6PCB7 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.88■□□□□ 0.93
SLC27A1Q6PCB7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.88■□□□□ 0.93
SLC27A1Q6PCB7 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
SLC27A1Q6PCB7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
SLC27A1Q6PCB7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SLC27A1Q6PCB7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SLC27A1Q6PCB7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
SLC27A1Q6PCB7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC27A1Q6PCB7 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC27A1Q6PCB7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC27A1Q6PCB7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
SLC27A1Q6PCB7 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC27A1Q6PCB7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC27A1Q6PCB7 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.87■□□□□ 0.93
SLC27A1Q6PCB7 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC27A1Q6PCB7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC20.87■□□□□ 0.93
SLC27A1Q6PCB7 ATP5G1P1-201ENST00000448724 379 ntBASIC20.87■□□□□ 0.93
SLC27A1Q6PCB7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC27A1Q6PCB7 AL353719.1-201ENST00000566847 864 ntBASIC20.87■□□□□ 0.93
SLC27A1Q6PCB7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.87■□□□□ 0.93
SLC27A1Q6PCB7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC27A1Q6PCB7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC27A1Q6PCB7 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC27A1Q6PCB7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SLC27A1Q6PCB7 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SLC27A1Q6PCB7 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.86■□□□□ 0.93
SLC27A1Q6PCB7 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC27A1Q6PCB7 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.86■□□□□ 0.93
SLC27A1Q6PCB7 AC125437.2-201ENST00000625180 2167 ntBASIC20.86■□□□□ 0.93
SLC27A1Q6PCB7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC27A1Q6PCB7 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC27A1Q6PCB7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC27A1Q6PCB7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.86■□□□□ 0.93
SLC27A1Q6PCB7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SLC27A1Q6PCB7 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC27A1Q6PCB7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC27A1Q6PCB7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SLC27A1Q6PCB7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC27A1Q6PCB7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
SLC27A1Q6PCB7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC27A1Q6PCB7 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SLC27A1Q6PCB7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC27A1Q6PCB7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC27A1Q6PCB7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SLC27A1Q6PCB7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 TSPY21P-201ENST00000433481 731 ntBASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SLC27A1Q6PCB7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC27A1Q6PCB7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC27A1Q6PCB7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC27A1Q6PCB7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC27A1Q6PCB7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC27A1Q6PCB7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC27A1Q6PCB7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC27A1Q6PCB7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC27A1Q6PCB7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SLC27A1Q6PCB7 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC27A1Q6PCB7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
SLC27A1Q6PCB7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC27A1Q6PCB7 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.84■□□□□ 0.93
SLC27A1Q6PCB7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC27A1Q6PCB7 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SLC27A1Q6PCB7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.84■□□□□ 0.93
SLC27A1Q6PCB7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC27A1Q6PCB7 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SLC27A1Q6PCB7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SLC27A1Q6PCB7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SLC27A1Q6PCB7 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.83■□□□□ 0.93
SLC27A1Q6PCB7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms