Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF544Q6NX49 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF544Q6NX49 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF544Q6NX49 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF544Q6NX49 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.66■□□□□ 0.42
ZNF544Q6NX49 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF544Q6NX49 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
ZNF544Q6NX49 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF544Q6NX49 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17.66■□□□□ 0.42
ZNF544Q6NX49 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
ZNF544Q6NX49 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF544Q6NX49 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF544Q6NX49 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF544Q6NX49 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ZNF544Q6NX49 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF544Q6NX49 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF544Q6NX49 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF544Q6NX49 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ZNF544Q6NX49 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 NME6-213ENST00000451657 871 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 INO80E-214ENST00000620599 515 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 ITM2C-210ENST00000620962 501 ntBASIC17.65■□□□□ 0.42
ZNF544Q6NX49 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 PCDHB18P-201ENST00000524813 2368 ntBASIC17.65■□□□□ 0.42
ZNF544Q6NX49 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.65■□□□□ 0.42
ZNF544Q6NX49 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF544Q6NX49 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.64■□□□□ 0.42
ZNF544Q6NX49 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
ZNF544Q6NX49 CYP21A1P-202ENST00000354927 1481 ntBASIC17.64■□□□□ 0.41
ZNF544Q6NX49 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
ZNF544Q6NX49 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 AP000997.3-201ENST00000623333 2250 ntBASIC17.63■□□□□ 0.41
ZNF544Q6NX49 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.63■□□□□ 0.41
ZNF544Q6NX49 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 KRT18P29-201ENST00000397031 1267 ntBASIC17.63■□□□□ 0.41
ZNF544Q6NX49 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.63■□□□□ 0.41
ZNF544Q6NX49 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms