Protein–RNA interactions for Protein: Q587I9

SFT2D3, Vesicle transport protein SFT2C, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFT2D3Q587I9 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 AC008687.6-201ENST00000596318 630 ntBASIC18.81■□□□□ 0.6
SFT2D3Q587I9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.81■□□□□ 0.6
SFT2D3Q587I9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 KRT17P3-201ENST00000420566 1262 ntBASIC18.8■□□□□ 0.6
SFT2D3Q587I9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 AC020916.1-201ENST00000587762 1774 ntBASIC18.8■□□□□ 0.6
SFT2D3Q587I9 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 BX119927.1-201ENST00000636596 1552 ntBASIC18.8■□□□□ 0.6
SFT2D3Q587I9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
SFT2D3Q587I9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SFT2D3Q587I9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SFT2D3Q587I9 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SFT2D3Q587I9 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SFT2D3Q587I9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SFT2D3Q587I9 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.79■□□□□ 0.6
SFT2D3Q587I9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SFT2D3Q587I9 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SFT2D3Q587I9 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SFT2D3Q587I9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.79■□□□□ 0.6
SFT2D3Q587I9 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SFT2D3Q587I9 AC023632.3-201ENST00000521633 145 ntBASIC18.79■□□□□ 0.6
SFT2D3Q587I9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.79■□□□□ 0.6
SFT2D3Q587I9 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SFT2D3Q587I9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SFT2D3Q587I9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
SFT2D3Q587I9 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SFT2D3Q587I9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.79■□□□□ 0.6
SFT2D3Q587I9 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.79■□□□□ 0.6
SFT2D3Q587I9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SFT2D3Q587I9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SFT2D3Q587I9 AC079598.2-202ENST00000546624 1451 ntBASIC18.78■□□□□ 0.6
SFT2D3Q587I9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SFT2D3Q587I9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SFT2D3Q587I9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SFT2D3Q587I9 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.78■□□□□ 0.6
SFT2D3Q587I9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SFT2D3Q587I9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SFT2D3Q587I9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SFT2D3Q587I9 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SFT2D3Q587I9 POM121L13P-201ENST00000422362 380 ntBASIC18.78■□□□□ 0.6
SFT2D3Q587I9 ABHD17AP6-201ENST00000458502 1044 ntBASIC18.78■□□□□ 0.6
SFT2D3Q587I9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.78■□□□□ 0.6
SFT2D3Q587I9 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.78■□□□□ 0.6
SFT2D3Q587I9 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SFT2D3Q587I9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms