Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H1AQ02539 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 FZD10-202ENST00000539839 3282 ntBASIC14.72□□□□□ -0.05
HIST1H1AQ02539 OR6D1P-202ENST00000641007 5290 ntBASIC14.72□□□□□ -0.05
HIST1H1AQ02539 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HIST1H1AQ02539 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 CROCCP5-201ENST00000436658 830 ntBASIC14.71□□□□□ -0.05
HIST1H1AQ02539 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.71□□□□□ -0.05
HIST1H1AQ02539 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 OAS3-207ENST00000551007 998 ntTSL 2 BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 AL121832.2-201ENST00000610979 668 ntBASIC14.71□□□□□ -0.05
HIST1H1AQ02539 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
HIST1H1AQ02539 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
HIST1H1AQ02539 CRK-204ENST00000574295 1391 ntTSL 5 BASIC14.71□□□□□ -0.06
HIST1H1AQ02539 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.71□□□□□ -0.06
HIST1H1AQ02539 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 139.8 ms