Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
IRX4P78413 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
IRX4P78413 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
IRX4P78413 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
IRX4P78413 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.01■□□□□ 0.79
IRX4P78413 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.01■□□□□ 0.79
IRX4P78413 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
IRX4P78413 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IRX4P78413 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
IRX4P78413 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
IRX4P78413 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.01■□□□□ 0.79
IRX4P78413 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20■□□□□ 0.79
IRX4P78413 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
IRX4P78413 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IRX4P78413 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IRX4P78413 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20■□□□□ 0.79
IRX4P78413 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IRX4P78413 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC20■□□□□ 0.79
IRX4P78413 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20■□□□□ 0.79
IRX4P78413 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IRX4P78413 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20■□□□□ 0.79
IRX4P78413 MIR6786-201ENST00000616843 113 ntBASIC20■□□□□ 0.79
IRX4P78413 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20■□□□□ 0.79
IRX4P78413 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
IRX4P78413 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
IRX4P78413 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
IRX4P78413 KRT8P36-201ENST00000489121 1440 ntBASIC20■□□□□ 0.79
IRX4P78413 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20■□□□□ 0.79
IRX4P78413 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20■□□□□ 0.79
IRX4P78413 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20■□□□□ 0.79
IRX4P78413 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
IRX4P78413 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IRX4P78413 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC19.99■□□□□ 0.79
IRX4P78413 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IRX4P78413 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
IRX4P78413 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IRX4P78413 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IRX4P78413 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.99■□□□□ 0.79
IRX4P78413 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IRX4P78413 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IRX4P78413 FAM197Y1-201ENST00000421178 764 ntBASIC19.99■□□□□ 0.79
IRX4P78413 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.99■□□□□ 0.79
IRX4P78413 AC005363.2-201ENST00000618631 242 ntBASIC19.99■□□□□ 0.79
IRX4P78413 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IRX4P78413 AC098818.2-201ENST00000564925 2320 ntBASIC19.99■□□□□ 0.79
IRX4P78413 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IRX4P78413 AC020763.4-201ENST00000623414 4170 ntBASIC19.99■□□□□ 0.79
IRX4P78413 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IRX4P78413 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
IRX4P78413 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.99■□□□□ 0.79
IRX4P78413 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
IRX4P78413 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.99■□□□□ 0.79
IRX4P78413 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
IRX4P78413 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.99■□□□□ 0.79
IRX4P78413 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
IRX4P78413 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
IRX4P78413 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
IRX4P78413 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
IRX4P78413 AC018445.3-201ENST00000624177 1945 ntBASIC19.98■□□□□ 0.79
IRX4P78413 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.98■□□□□ 0.79
IRX4P78413 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
IRX4P78413 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
IRX4P78413 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.98■□□□□ 0.79
IRX4P78413 AC145285.6-201ENST00000604632 637 ntBASIC19.98■□□□□ 0.79
IRX4P78413 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.98■□□□□ 0.79
IRX4P78413 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.98■□□□□ 0.79
IRX4P78413 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
IRX4P78413 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
IRX4P78413 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
IRX4P78413 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
IRX4P78413 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.98■□□□□ 0.79
IRX4P78413 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
IRX4P78413 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX4P78413 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX4P78413 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX4P78413 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX4P78413 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX4P78413 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX4P78413 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.97■□□□□ 0.79
IRX4P78413 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX4P78413 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.97■□□□□ 0.79
IRX4P78413 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
IRX4P78413 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX4P78413 KRT16P5-201ENST00000455284 522 ntBASIC19.97■□□□□ 0.79
IRX4P78413 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.97■□□□□ 0.79
IRX4P78413 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.97■□□□□ 0.79
IRX4P78413 P4HB-223ENST00000576390 439 ntTSL 4 BASIC19.97■□□□□ 0.79
IRX4P78413 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.97■□□□□ 0.79
IRX4P78413 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX4P78413 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX4P78413 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.97■□□□□ 0.79
IRX4P78413 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
IRX4P78413 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
IRX4P78413 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
IRX4P78413 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
IRX4P78413 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
IRX4P78413 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
IRX4P78413 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
IRX4P78413 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
IRX4P78413 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms