Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
RPS4XP62701 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4XP62701 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
RPS4XP62701 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.4■□□□□ 0.38
RPS4XP62701 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4XP62701 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4XP62701 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
RPS4XP62701 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4XP62701 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RPS4XP62701 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RPS4XP62701 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RPS4XP62701 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.4■□□□□ 0.38
RPS4XP62701 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.4■□□□□ 0.38
RPS4XP62701 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RPS4XP62701 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4XP62701 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4XP62701 AL049812.1-201ENST00000432563 2267 ntBASIC17.39■□□□□ 0.37
RPS4XP62701 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4XP62701 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4XP62701 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
RPS4XP62701 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4XP62701 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4XP62701 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4XP62701 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
RPS4XP62701 TUBB8P6-201ENST00000436895 1288 ntBASIC17.39■□□□□ 0.37
RPS4XP62701 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.39■□□□□ 0.37
RPS4XP62701 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4XP62701 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RPS4XP62701 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.39■□□□□ 0.37
RPS4XP62701 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4XP62701 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4XP62701 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4XP62701 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4XP62701 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
RPS4XP62701 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4XP62701 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.39■□□□□ 0.37
RPS4XP62701 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4XP62701 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4XP62701 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.39■□□□□ 0.37
RPS4XP62701 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RPS4XP62701 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
RPS4XP62701 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RPS4XP62701 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4XP62701 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.38■□□□□ 0.37
RPS4XP62701 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4XP62701 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4XP62701 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4XP62701 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.38■□□□□ 0.37
RPS4XP62701 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4XP62701 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RPS4XP62701 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4XP62701 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.38■□□□□ 0.37
RPS4XP62701 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4XP62701 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
RPS4XP62701 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.38■□□□□ 0.37
RPS4XP62701 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4XP62701 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RPS4XP62701 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4XP62701 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4XP62701 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.38■□□□□ 0.37
RPS4XP62701 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4XP62701 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4XP62701 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.38■□□□□ 0.37
RPS4XP62701 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4XP62701 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4XP62701 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RPS4XP62701 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.38■□□□□ 0.37
RPS4XP62701 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4XP62701 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RPS4XP62701 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.38■□□□□ 0.37
RPS4XP62701 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.38■□□□□ 0.37
RPS4XP62701 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.38■□□□□ 0.37
RPS4XP62701 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4XP62701 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
RPS4XP62701 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPS4XP62701 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
RPS4XP62701 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4XP62701 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4XP62701 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.37■□□□□ 0.37
RPS4XP62701 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4XP62701 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.37■□□□□ 0.37
RPS4XP62701 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RPS4XP62701 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RPS4XP62701 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4XP62701 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RPS4XP62701 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4XP62701 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4XP62701 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4XP62701 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4XP62701 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.37■□□□□ 0.37
RPS4XP62701 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPS4XP62701 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.37■□□□□ 0.37
RPS4XP62701 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.37■□□□□ 0.37
RPS4XP62701 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.37■□□□□ 0.37
RPS4XP62701 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.37■□□□□ 0.37
RPS4XP62701 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.37■□□□□ 0.37
RPS4XP62701 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.37■□□□□ 0.37
RPS4XP62701 CROCCP3-202ENST00000420820 1947 ntBASIC17.37■□□□□ 0.37
RPS4XP62701 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
RPS4XP62701 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms