Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.91■□□□□ 0.3
FOXG1P55316 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXG1P55316 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXG1P55316 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXG1P55316 MIR1238-201ENST00000408483 83 ntBASIC16.91■□□□□ 0.3
FOXG1P55316 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
FOXG1P55316 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXG1P55316 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
FOXG1P55316 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC16.91■□□□□ 0.3
FOXG1P55316 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.91■□□□□ 0.3
FOXG1P55316 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FOXG1P55316 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
FOXG1P55316 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.91■□□□□ 0.3
FOXG1P55316 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXG1P55316 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXG1P55316 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FOXG1P55316 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.91■□□□□ 0.3
FOXG1P55316 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.91■□□□□ 0.3
FOXG1P55316 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXG1P55316 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.91■□□□□ 0.3
FOXG1P55316 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXG1P55316 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXG1P55316 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXG1P55316 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.9■□□□□ 0.3
FOXG1P55316 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXG1P55316 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.9■□□□□ 0.3
FOXG1P55316 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
FOXG1P55316 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXG1P55316 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXG1P55316 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FOXG1P55316 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXG1P55316 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXG1P55316 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FOXG1P55316 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXG1P55316 AP000692.2-201ENST00000608391 879 ntBASIC16.9■□□□□ 0.3
FOXG1P55316 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
FOXG1P55316 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXG1P55316 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FOXG1P55316 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXG1P55316 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXG1P55316 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXG1P55316 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXG1P55316 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FOXG1P55316 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FOXG1P55316 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FOXG1P55316 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.9■□□□□ 0.3
FOXG1P55316 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
FOXG1P55316 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
FOXG1P55316 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
FOXG1P55316 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
FOXG1P55316 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
FOXG1P55316 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
FOXG1P55316 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXG1P55316 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXG1P55316 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FOXG1P55316 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXG1P55316 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXG1P55316 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
FOXG1P55316 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXG1P55316 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
FOXG1P55316 AC087499.1-201ENST00000418141 1075 ntBASIC16.89■□□□□ 0.29
FOXG1P55316 FAM207BP-201ENST00000447172 505 ntBASIC16.89■□□□□ 0.29
FOXG1P55316 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXG1P55316 AC097488.1-201ENST00000507834 756 ntBASIC16.89■□□□□ 0.29
FOXG1P55316 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.89■□□□□ 0.29
FOXG1P55316 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.89■□□□□ 0.29
FOXG1P55316 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXG1P55316 SLC25A1P4-201ENST00000567977 778 ntBASIC16.89■□□□□ 0.29
FOXG1P55316 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.89■□□□□ 0.29
FOXG1P55316 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.89■□□□□ 0.29
FOXG1P55316 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.89■□□□□ 0.29
FOXG1P55316 AC073912.3-201ENST00000624414 853 ntBASIC16.89■□□□□ 0.29
FOXG1P55316 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
FOXG1P55316 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXG1P55316 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.89■□□□□ 0.29
FOXG1P55316 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.89■□□□□ 0.29
FOXG1P55316 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXG1P55316 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXG1P55316 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
FOXG1P55316 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FOXG1P55316 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.89■□□□□ 0.29
FOXG1P55316 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXG1P55316 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.89■□□□□ 0.29
FOXG1P55316 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FOXG1P55316 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.89■□□□□ 0.29
FOXG1P55316 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXG1P55316 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FOXG1P55316 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXG1P55316 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXG1P55316 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.88■□□□□ 0.29
FOXG1P55316 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FOXG1P55316 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
FOXG1P55316 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXG1P55316 CYP2D8P-201ENST00000433633 1490 ntBASIC16.88■□□□□ 0.29
FOXG1P55316 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXG1P55316 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FOXG1P55316 AC116562.4-201ENST00000641316 2276 ntBASIC16.88■□□□□ 0.29
FOXG1P55316 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
FOXG1P55316 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
FOXG1P55316 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms