Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PMS1P54277 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
PMS1P54277 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.21■□□□□ 0.99
PMS1P54277 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS1P54277 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS1P54277 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS1P54277 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
PMS1P54277 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.99
PMS1P54277 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PMS1P54277 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PMS1P54277 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PMS1P54277 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PMS1P54277 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PMS1P54277 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
PMS1P54277 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PMS1P54277 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.2■□□□□ 0.98
PMS1P54277 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PMS1P54277 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.2■□□□□ 0.98
PMS1P54277 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PMS1P54277 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
PMS1P54277 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.2■□□□□ 0.98
PMS1P54277 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PMS1P54277 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.2■□□□□ 0.98
PMS1P54277 KRT18P6-201ENST00000555540 1265 ntBASIC21.2■□□□□ 0.98
PMS1P54277 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PMS1P54277 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PMS1P54277 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PMS1P54277 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.2■□□□□ 0.98
PMS1P54277 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
PMS1P54277 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
PMS1P54277 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
PMS1P54277 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC21.2■□□□□ 0.98
PMS1P54277 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
PMS1P54277 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PMS1P54277 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
PMS1P54277 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PMS1P54277 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PMS1P54277 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PMS1P54277 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PMS1P54277 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
PMS1P54277 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
PMS1P54277 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PMS1P54277 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PMS1P54277 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PMS1P54277 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PMS1P54277 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.19■□□□□ 0.98
PMS1P54277 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PMS1P54277 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
PMS1P54277 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PMS1P54277 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.19■□□□□ 0.98
PMS1P54277 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.19■□□□□ 0.98
PMS1P54277 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.19■□□□□ 0.98
PMS1P54277 HLA-A-209ENST00000638375 975 ntBASIC21.19■□□□□ 0.98
PMS1P54277 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
PMS1P54277 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.19■□□□□ 0.98
PMS1P54277 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.19■□□□□ 0.98
PMS1P54277 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
PMS1P54277 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC21.19■□□□□ 0.98
PMS1P54277 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.19■□□□□ 0.98
PMS1P54277 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
PMS1P54277 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
PMS1P54277 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
PMS1P54277 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.19■□□□□ 0.98
PMS1P54277 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
PMS1P54277 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.19■□□□□ 0.98
PMS1P54277 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PMS1P54277 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
PMS1P54277 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PMS1P54277 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PMS1P54277 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.18■□□□□ 0.98
PMS1P54277 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.18■□□□□ 0.98
PMS1P54277 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
PMS1P54277 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC21.18■□□□□ 0.98
PMS1P54277 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PMS1P54277 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC21.18■□□□□ 0.98
PMS1P54277 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.18■□□□□ 0.98
PMS1P54277 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
PMS1P54277 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.18■□□□□ 0.98
PMS1P54277 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
PMS1P54277 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
PMS1P54277 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PMS1P54277 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.17■□□□□ 0.98
PMS1P54277 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
PMS1P54277 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.17■□□□□ 0.98
PMS1P54277 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC21.17■□□□□ 0.98
PMS1P54277 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
PMS1P54277 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
PMS1P54277 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PMS1P54277 PRKY-204ENST00000533551 1019 ntBASIC21.17■□□□□ 0.98
PMS1P54277 C1QL1P1-201ENST00000568105 661 ntBASIC21.17■□□□□ 0.98
PMS1P54277 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.17■□□□□ 0.98
PMS1P54277 AL023875.1-201ENST00000640777 796 ntBASIC21.17■□□□□ 0.98
PMS1P54277 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC21.17■□□□□ 0.98
PMS1P54277 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PMS1P54277 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
PMS1P54277 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PMS1P54277 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
PMS1P54277 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21.17■□□□□ 0.98
PMS1P54277 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
PMS1P54277 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms