Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 SDHAP1-207ENST00000440850 2000 ntBASIC18.96■□□□□ 0.63
SLC1A6P48664 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC1A6P48664 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC1A6P48664 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC1A6P48664 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SLC1A6P48664 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC1A6P48664 IRX1P1-201ENST00000438849 1838 ntBASIC18.95■□□□□ 0.62
SLC1A6P48664 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC1A6P48664 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
SLC1A6P48664 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC1A6P48664 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC1A6P48664 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SLC1A6P48664 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
SLC1A6P48664 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC1A6P48664 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC1A6P48664 GPX1P1-201ENST00000388829 606 ntBASIC18.95■□□□□ 0.62
SLC1A6P48664 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC1A6P48664 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC1A6P48664 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC1A6P48664 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC1A6P48664 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC1A6P48664 AC104417.2-201ENST00000562989 1793 ntBASIC18.95■□□□□ 0.62
SLC1A6P48664 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC1A6P48664 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC1A6P48664 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC1A6P48664 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC1A6P48664 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC1A6P48664 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC1A6P48664 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC1A6P48664 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.94■□□□□ 0.62
SLC1A6P48664 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.94■□□□□ 0.62
SLC1A6P48664 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC1A6P48664 AC231657.2-201ENST00000624556 255 ntBASIC18.94■□□□□ 0.62
SLC1A6P48664 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC1A6P48664 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC1A6P48664 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC1A6P48664 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC1A6P48664 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC1A6P48664 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC1A6P48664 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC1A6P48664 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC1A6P48664 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A6P48664 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A6P48664 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A6P48664 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A6P48664 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A6P48664 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A6P48664 AC093787.1-201ENST00000450396 207 ntBASIC18.93■□□□□ 0.62
SLC1A6P48664 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.93■□□□□ 0.62
SLC1A6P48664 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC1A6P48664 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A6P48664 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A6P48664 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A6P48664 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A6P48664 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A6P48664 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A6P48664 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.93■□□□□ 0.62
SLC1A6P48664 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC1A6P48664 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
SLC1A6P48664 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.93■□□□□ 0.62
SLC1A6P48664 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.93■□□□□ 0.62
SLC1A6P48664 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A6P48664 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SLC1A6P48664 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A6P48664 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SLC1A6P48664 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.92■□□□□ 0.62
SLC1A6P48664 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A6P48664 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A6P48664 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A6P48664 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SLC1A6P48664 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SLC1A6P48664 BICD1-207ENST00000551848 1962 ntBASIC18.92■□□□□ 0.62
SLC1A6P48664 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A6P48664 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A6P48664 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.92■□□□□ 0.62
SLC1A6P48664 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A6P48664 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A6P48664 AL512625.2-201ENST00000417533 625 ntBASIC18.92■□□□□ 0.62
SLC1A6P48664 AC007322.1-201ENST00000426983 750 ntBASIC18.92■□□□□ 0.62
SLC1A6P48664 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.92■□□□□ 0.62
SLC1A6P48664 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC1A6P48664 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.92■□□□□ 0.62
SLC1A6P48664 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A6P48664 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A6P48664 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A6P48664 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.92■□□□□ 0.62
SLC1A6P48664 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A6P48664 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A6P48664 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A6P48664 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
SLC1A6P48664 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A6P48664 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.92■□□□□ 0.62
SLC1A6P48664 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SLC1A6P48664 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.92■□□□□ 0.62
SLC1A6P48664 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.91■□□□□ 0.62
SLC1A6P48664 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A6P48664 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SLC1A6P48664 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.91■□□□□ 0.62
SLC1A6P48664 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SLC1A6P48664 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms