Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 CRAT-202ENST00000393384 973 ntTSL 2 BASIC21.29■■□□□ 1
RFC5P40937 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
RFC5P40937 EGLN1P1-201ENST00000531623 762 ntBASIC21.29■■□□□ 1
RFC5P40937 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFC5P40937 CKBP1-201ENST00000565489 1086 ntBASIC21.29■■□□□ 1
RFC5P40937 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFC5P40937 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RFC5P40937 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.29■■□□□ 1
RFC5P40937 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFC5P40937 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFC5P40937 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.28■■□□□ 1
RFC5P40937 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.28■■□□□ 1
RFC5P40937 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFC5P40937 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFC5P40937 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFC5P40937 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFC5P40937 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RFC5P40937 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.28■■□□□ 1
RFC5P40937 TSPY14P-201ENST00000303979 915 ntBASIC21.28■■□□□ 1
RFC5P40937 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
RFC5P40937 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFC5P40937 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RFC5P40937 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.28■■□□□ 1
RFC5P40937 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.28■■□□□ 1
RFC5P40937 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RFC5P40937 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFC5P40937 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.28■■□□□ 1
RFC5P40937 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFC5P40937 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.28■■□□□ 1
RFC5P40937 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
RFC5P40937 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFC5P40937 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
RFC5P40937 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFC5P40937 KRT18P22-201ENST00000402024 1347 ntBASIC21.28■■□□□ 1
RFC5P40937 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC21.28■■□□□ 1
RFC5P40937 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.28■■□□□ 1
RFC5P40937 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFC5P40937 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.27■■□□□ 1
RFC5P40937 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.27■■□□□ 1
RFC5P40937 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFC5P40937 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RFC5P40937 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFC5P40937 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
RFC5P40937 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFC5P40937 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.27■■□□□ 1
RFC5P40937 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.27■■□□□ 1
RFC5P40937 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.27■■□□□ 1
RFC5P40937 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
RFC5P40937 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
RFC5P40937 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC21.27■■□□□ 1
RFC5P40937 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.27■■□□□ 1
RFC5P40937 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RFC5P40937 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFC5P40937 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.27■■□□□ 1
RFC5P40937 SDHAP1-207ENST00000440850 2000 ntBASIC21.27■■□□□ 1
RFC5P40937 KRT8P11-201ENST00000409686 1436 ntBASIC21.27■■□□□ 1
RFC5P40937 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
RFC5P40937 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFC5P40937 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RFC5P40937 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
RFC5P40937 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RFC5P40937 PCDHAC2-203ENST00000615316 3011 ntBASIC21.26■□□□□ 0.99
RFC5P40937 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC5P40937 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.26■□□□□ 0.99
RFC5P40937 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC5P40937 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RFC5P40937 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RFC5P40937 SLC25A1P2-201ENST00000430693 912 ntBASIC21.26■□□□□ 0.99
RFC5P40937 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.26■□□□□ 0.99
RFC5P40937 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.26■□□□□ 0.99
RFC5P40937 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
RFC5P40937 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC5P40937 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.26■□□□□ 0.99
RFC5P40937 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC5P40937 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
RFC5P40937 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFC5P40937 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.26■□□□□ 0.99
RFC5P40937 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.26■□□□□ 0.99
RFC5P40937 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.25■□□□□ 0.99
RFC5P40937 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFC5P40937 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC5P40937 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.25■□□□□ 0.99
RFC5P40937 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC5P40937 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC5P40937 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RFC5P40937 TSPY21P-201ENST00000433481 731 ntBASIC21.25■□□□□ 0.99
RFC5P40937 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFC5P40937 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.25■□□□□ 0.99
RFC5P40937 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC21.25■□□□□ 0.99
RFC5P40937 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RFC5P40937 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.25■□□□□ 0.99
RFC5P40937 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
RFC5P40937 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RFC5P40937 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.25■□□□□ 0.99
RFC5P40937 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC5P40937 BID-204ENST00000399767 2129 ntTSL 2 BASIC21.25■□□□□ 0.99
RFC5P40937 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC5P40937 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RFC5P40937 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
RFC5P40937 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms