Protein–RNA interactions for Protein: P40429

RPL13A, 60S ribosomal protein L13a, humanhuman

Known RBP Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13AP40429 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPL13AP40429 PTMA-205ENST00000410064 814 ntTSL 2 BASIC13.3□□□□□ -0.28
RPL13AP40429 AC010141.3-201ENST00000456659 717 ntBASIC13.3□□□□□ -0.28
RPL13AP40429 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RPL13AP40429 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPL13AP40429 AC011484.1-201ENST00000377652 1995 ntBASIC13.3□□□□□ -0.28
RPL13AP40429 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC13.3□□□□□ -0.28
RPL13AP40429 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC13.3□□□□□ -0.28
RPL13AP40429 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPL13AP40429 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RPL13AP40429 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPL13AP40429 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC13.3□□□□□ -0.28
RPL13AP40429 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPL13AP40429 AL390961.4-201ENST00000623958 2535 ntBASIC13.3□□□□□ -0.28
RPL13AP40429 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RPL13AP40429 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
RPL13AP40429 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC13.29□□□□□ -0.28
RPL13AP40429 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.29□□□□□ -0.28
RPL13AP40429 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 LINC01465-201ENST00000408887 1940 ntBASIC13.29□□□□□ -0.28
RPL13AP40429 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RPL13AP40429 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC13.29□□□□□ -0.28
RPL13AP40429 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RPL13AP40429 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
RPL13AP40429 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RPL13AP40429 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 HES6-206ENST00000409574 738 ntTSL 2 BASIC13.29□□□□□ -0.28
RPL13AP40429 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC13.29□□□□□ -0.28
RPL13AP40429 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC13.29□□□□□ -0.28
RPL13AP40429 AC027682.1-201ENST00000562846 899 ntBASIC13.29□□□□□ -0.28
RPL13AP40429 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC13.29□□□□□ -0.28
RPL13AP40429 PRORSD1P-202ENST00000563365 2154 ntBASIC13.29□□□□□ -0.28
RPL13AP40429 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC13.29□□□□□ -0.28
RPL13AP40429 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RPL13AP40429 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RPL13AP40429 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
RPL13AP40429 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 STX4-202ENST00000394998 1498 ntTSL 2 BASIC13.29□□□□□ -0.28
RPL13AP40429 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
RPL13AP40429 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
RPL13AP40429 AC133637.1-201ENST00000624115 1537 ntBASIC13.29□□□□□ -0.28
RPL13AP40429 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
RPL13AP40429 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
RPL13AP40429 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
RPL13AP40429 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 AC106820.2-201ENST00000563775 3264 ntBASIC13.28□□□□□ -0.28
RPL13AP40429 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
RPL13AP40429 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
RPL13AP40429 TREX1-205ENST00000625293 1783 ntBASIC13.28□□□□□ -0.28
RPL13AP40429 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC13.28□□□□□ -0.28
RPL13AP40429 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
RPL13AP40429 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.28□□□□□ -0.28
RPL13AP40429 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC13.28□□□□□ -0.28
RPL13AP40429 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC13.28□□□□□ -0.28
RPL13AP40429 AC136469.2-201ENST00000623944 1028 ntBASIC13.28□□□□□ -0.28
RPL13AP40429 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
RPL13AP40429 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
RPL13AP40429 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RPL13AP40429 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RPL13AP40429 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
RPL13AP40429 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
RPL13AP40429 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.27□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms