Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.33■□□□□ 0.85
GRIK1P39086 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.33■□□□□ 0.84
GRIK1P39086 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
GRIK1P39086 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.33■□□□□ 0.84
GRIK1P39086 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
GRIK1P39086 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
GRIK1P39086 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
GRIK1P39086 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.84
GRIK1P39086 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.32■□□□□ 0.84
GRIK1P39086 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.32■□□□□ 0.84
GRIK1P39086 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
GRIK1P39086 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
GRIK1P39086 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
GRIK1P39086 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GRIK1P39086 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
GRIK1P39086 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.32■□□□□ 0.84
GRIK1P39086 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GRIK1P39086 AC104417.2-201ENST00000562989 1793 ntBASIC20.32■□□□□ 0.84
GRIK1P39086 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.32■□□□□ 0.84
GRIK1P39086 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.32■□□□□ 0.84
GRIK1P39086 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.32■□□□□ 0.84
GRIK1P39086 KRT18P21-201ENST00000515767 1272 ntBASIC20.32■□□□□ 0.84
GRIK1P39086 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.32■□□□□ 0.84
GRIK1P39086 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.32■□□□□ 0.84
GRIK1P39086 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GRIK1P39086 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GRIK1P39086 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.32■□□□□ 0.84
GRIK1P39086 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.32■□□□□ 0.84
GRIK1P39086 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
GRIK1P39086 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
GRIK1P39086 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.32■□□□□ 0.84
GRIK1P39086 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
GRIK1P39086 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
GRIK1P39086 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.31■□□□□ 0.84
GRIK1P39086 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.31■□□□□ 0.84
GRIK1P39086 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.31■□□□□ 0.84
GRIK1P39086 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GRIK1P39086 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
GRIK1P39086 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
GRIK1P39086 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GRIK1P39086 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.31■□□□□ 0.84
GRIK1P39086 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.31■□□□□ 0.84
GRIK1P39086 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GRIK1P39086 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GRIK1P39086 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GRIK1P39086 AC096733.2-201ENST00000609937 1394 ntBASIC20.31■□□□□ 0.84
GRIK1P39086 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
GRIK1P39086 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
GRIK1P39086 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.3■□□□□ 0.84
GRIK1P39086 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.3■□□□□ 0.84
GRIK1P39086 KRT18P22-201ENST00000402024 1347 ntBASIC20.3■□□□□ 0.84
GRIK1P39086 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GRIK1P39086 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.3■□□□□ 0.84
GRIK1P39086 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GRIK1P39086 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.3■□□□□ 0.84
GRIK1P39086 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
GRIK1P39086 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC20.3■□□□□ 0.84
GRIK1P39086 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.3■□□□□ 0.84
GRIK1P39086 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.3■□□□□ 0.84
GRIK1P39086 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.3■□□□□ 0.84
GRIK1P39086 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
GRIK1P39086 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
GRIK1P39086 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
GRIK1P39086 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.3■□□□□ 0.84
GRIK1P39086 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
GRIK1P39086 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GRIK1P39086 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.3■□□□□ 0.84
GRIK1P39086 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GRIK1P39086 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.29■□□□□ 0.84
GRIK1P39086 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.29■□□□□ 0.84
GRIK1P39086 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.29■□□□□ 0.84
GRIK1P39086 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIK1P39086 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GRIK1P39086 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.29■□□□□ 0.84
GRIK1P39086 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIK1P39086 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.29■□□□□ 0.84
GRIK1P39086 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
GRIK1P39086 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIK1P39086 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.29■□□□□ 0.84
GRIK1P39086 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIK1P39086 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIK1P39086 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
GRIK1P39086 FAM210CP-201ENST00000445714 574 ntBASIC20.29■□□□□ 0.84
GRIK1P39086 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GRIK1P39086 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.29■□□□□ 0.84
GRIK1P39086 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
GRIK1P39086 PPOX-219ENST00000544598 813 ntTSL 2 BASIC20.29■□□□□ 0.84
GRIK1P39086 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.29■□□□□ 0.84
GRIK1P39086 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIK1P39086 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIK1P39086 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
GRIK1P39086 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.29■□□□□ 0.84
GRIK1P39086 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
GRIK1P39086 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GRIK1P39086 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIK1P39086 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
GRIK1P39086 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
GRIK1P39086 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.29■□□□□ 0.84
GRIK1P39086 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GRIK1P39086 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms