Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ATP6V1AP38606 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC24.59■■□□□ 1.53
ATP6V1AP38606 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ATP6V1AP38606 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ATP6V1AP38606 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ATP6V1AP38606 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
ATP6V1AP38606 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC24.58■■□□□ 1.53
ATP6V1AP38606 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
ATP6V1AP38606 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC24.58■■□□□ 1.53
ATP6V1AP38606 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC24.58■■□□□ 1.53
ATP6V1AP38606 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
ATP6V1AP38606 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
ATP6V1AP38606 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC24.58■■□□□ 1.53
ATP6V1AP38606 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
ATP6V1AP38606 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
ATP6V1AP38606 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
ATP6V1AP38606 ILF2-202ENST00000368681 726 ntTSL 2 BASIC24.58■■□□□ 1.53
ATP6V1AP38606 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
ATP6V1AP38606 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
ATP6V1AP38606 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC24.58■■□□□ 1.53
ATP6V1AP38606 AL645929.1-201ENST00000420084 975 ntBASIC24.58■■□□□ 1.53
ATP6V1AP38606 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
ATP6V1AP38606 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
ATP6V1AP38606 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
ATP6V1AP38606 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC24.58■■□□□ 1.53
ATP6V1AP38606 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
ATP6V1AP38606 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
ATP6V1AP38606 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
ATP6V1AP38606 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
ATP6V1AP38606 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC24.57■■□□□ 1.52
ATP6V1AP38606 DET1-207ENST00000564406 2315 ntTSL 2 BASIC24.57■■□□□ 1.52
ATP6V1AP38606 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
ATP6V1AP38606 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
ATP6V1AP38606 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC24.57■■□□□ 1.52
ATP6V1AP38606 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
ATP6V1AP38606 AC246785.2-201ENST00000432512 513 ntBASIC24.57■■□□□ 1.52
ATP6V1AP38606 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC24.57■■□□□ 1.52
ATP6V1AP38606 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC24.57■■□□□ 1.52
ATP6V1AP38606 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC24.57■■□□□ 1.52
ATP6V1AP38606 AC009237.14-201ENST00000609975 1594 ntBASIC24.57■■□□□ 1.52
ATP6V1AP38606 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC24.57■■□□□ 1.52
ATP6V1AP38606 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ATP6V1AP38606 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC24.57■■□□□ 1.52
ATP6V1AP38606 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC24.57■■□□□ 1.52
ATP6V1AP38606 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC24.57■■□□□ 1.52
ATP6V1AP38606 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC24.57■■□□□ 1.52
ATP6V1AP38606 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
ATP6V1AP38606 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
ATP6V1AP38606 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
ATP6V1AP38606 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
ATP6V1AP38606 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
ATP6V1AP38606 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC24.56■■□□□ 1.52
ATP6V1AP38606 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC24.56■■□□□ 1.52
ATP6V1AP38606 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC24.56■■□□□ 1.52
ATP6V1AP38606 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
ATP6V1AP38606 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ATP6V1AP38606 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ATP6V1AP38606 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC24.56■■□□□ 1.52
ATP6V1AP38606 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC24.56■■□□□ 1.52
ATP6V1AP38606 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC24.56■■□□□ 1.52
ATP6V1AP38606 RASA4DP-201ENST00000460726 1199 ntBASIC24.56■■□□□ 1.52
ATP6V1AP38606 SDHD-206ENST00000528182 754 ntTSL 3 BASIC24.56■■□□□ 1.52
ATP6V1AP38606 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC24.56■■□□□ 1.52
ATP6V1AP38606 MIR3652-201ENST00000579335 131 ntBASIC24.56■■□□□ 1.52
ATP6V1AP38606 PRR29-207ENST00000580752 458 ntTSL 3 BASIC24.56■■□□□ 1.52
ATP6V1AP38606 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC24.56■■□□□ 1.52
ATP6V1AP38606 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC24.56■■□□□ 1.52
ATP6V1AP38606 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
ATP6V1AP38606 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ATP6V1AP38606 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ATP6V1AP38606 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ATP6V1AP38606 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ATP6V1AP38606 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC24.55■■□□□ 1.52
ATP6V1AP38606 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ATP6V1AP38606 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC24.55■■□□□ 1.52
ATP6V1AP38606 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
ATP6V1AP38606 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC24.55■■□□□ 1.52
ATP6V1AP38606 SKP2-204ENST00000508514 821 ntTSL 3 BASIC24.55■■□□□ 1.52
ATP6V1AP38606 AC092329.2-201ENST00000598402 547 ntBASIC24.55■■□□□ 1.52
ATP6V1AP38606 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
ATP6V1AP38606 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC24.55■■□□□ 1.52
ATP6V1AP38606 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
ATP6V1AP38606 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ATP6V1AP38606 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC24.55■■□□□ 1.52
ATP6V1AP38606 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ATP6V1AP38606 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
ATP6V1AP38606 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ATP6V1AP38606 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC24.55■■□□□ 1.52
ATP6V1AP38606 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC24.54■■□□□ 1.52
ATP6V1AP38606 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
ATP6V1AP38606 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ATP6V1AP38606 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ATP6V1AP38606 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC24.54■■□□□ 1.52
ATP6V1AP38606 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
ATP6V1AP38606 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
ATP6V1AP38606 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC24.54■■□□□ 1.52
ATP6V1AP38606 PRELID1P1-202ENST00000567272 903 ntBASIC24.54■■□□□ 1.52
ATP6V1AP38606 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC24.54■■□□□ 1.52
ATP6V1AP38606 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC24.54■■□□□ 1.52
ATP6V1AP38606 RN7SL510P-201ENST00000581311 263 ntBASIC24.54■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms