Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.06■□□□□ 0.96
KRT9P35527 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT9P35527 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT9P35527 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT9P35527 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT9P35527 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.06■□□□□ 0.96
KRT9P35527 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.06■□□□□ 0.96
KRT9P35527 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC21.06■□□□□ 0.96
KRT9P35527 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC21.06■□□□□ 0.96
KRT9P35527 PNMA6B-201ENST00000538162 1200 ntBASIC21.06■□□□□ 0.96
KRT9P35527 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.06■□□□□ 0.96
KRT9P35527 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC21.06■□□□□ 0.96
KRT9P35527 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.06■□□□□ 0.96
KRT9P35527 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
KRT9P35527 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT9P35527 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT9P35527 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KRT9P35527 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KRT9P35527 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
KRT9P35527 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.05■□□□□ 0.96
KRT9P35527 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT9P35527 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRT9P35527 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.05■□□□□ 0.96
KRT9P35527 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRT9P35527 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRT9P35527 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRT9P35527 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT9P35527 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
KRT9P35527 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC21.05■□□□□ 0.96
KRT9P35527 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
KRT9P35527 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.05■□□□□ 0.96
KRT9P35527 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.05■□□□□ 0.96
KRT9P35527 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.05■□□□□ 0.96
KRT9P35527 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21.05■□□□□ 0.96
KRT9P35527 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT9P35527 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
KRT9P35527 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT9P35527 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
KRT9P35527 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT9P35527 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
KRT9P35527 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT9P35527 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT9P35527 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT9P35527 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT9P35527 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.04■□□□□ 0.96
KRT9P35527 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.04■□□□□ 0.96
KRT9P35527 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
KRT9P35527 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
KRT9P35527 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT9P35527 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT9P35527 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC21.04■□□□□ 0.96
KRT9P35527 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
KRT9P35527 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT9P35527 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT9P35527 AC104581.1-202ENST00000635932 2618 ntBASIC21.04■□□□□ 0.96
KRT9P35527 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KRT9P35527 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.04■□□□□ 0.96
KRT9P35527 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
KRT9P35527 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT9P35527 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.03■□□□□ 0.96
KRT9P35527 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC21.03■□□□□ 0.96
KRT9P35527 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.03■□□□□ 0.96
KRT9P35527 AC138932.1-201ENST00000534164 6830 ntBASIC21.03■□□□□ 0.96
KRT9P35527 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT9P35527 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT9P35527 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.03■□□□□ 0.96
KRT9P35527 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.03■□□□□ 0.96
KRT9P35527 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.03■□□□□ 0.96
KRT9P35527 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.03■□□□□ 0.96
KRT9P35527 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
KRT9P35527 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.03■□□□□ 0.96
KRT9P35527 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT9P35527 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT9P35527 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT9P35527 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC21.03■□□□□ 0.96
KRT9P35527 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.03■□□□□ 0.96
KRT9P35527 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
KRT9P35527 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT9P35527 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT9P35527 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
KRT9P35527 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.03■□□□□ 0.96
KRT9P35527 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT9P35527 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.02■□□□□ 0.96
KRT9P35527 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC21.02■□□□□ 0.96
KRT9P35527 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT9P35527 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KRT9P35527 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
KRT9P35527 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT9P35527 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KRT9P35527 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.02■□□□□ 0.96
KRT9P35527 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.02■□□□□ 0.96
KRT9P35527 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.02■□□□□ 0.96
KRT9P35527 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT9P35527 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
KRT9P35527 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT9P35527 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
KRT9P35527 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
KRT9P35527 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
KRT9P35527 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.95
KRT9P35527 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.02■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms