Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPA3P35244 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPA3P35244 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RPA3P35244 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RPA3P35244 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RPA3P35244 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RPA3P35244 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPA3P35244 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPA3P35244 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.46■□□□□ 0.71
RPA3P35244 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPA3P35244 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.46■□□□□ 0.71
RPA3P35244 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
RPA3P35244 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RPA3P35244 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
RPA3P35244 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPA3P35244 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.46■□□□□ 0.71
RPA3P35244 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
RPA3P35244 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPA3P35244 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.46■□□□□ 0.71
RPA3P35244 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RPA3P35244 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPA3P35244 AC018470.1-201ENST00000624790 3129 ntBASIC19.46■□□□□ 0.71
RPA3P35244 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPA3P35244 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
RPA3P35244 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.46■□□□□ 0.71
RPA3P35244 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPA3P35244 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RPA3P35244 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.45■□□□□ 0.7
RPA3P35244 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPA3P35244 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPA3P35244 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
RPA3P35244 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPA3P35244 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPA3P35244 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.45■□□□□ 0.7
RPA3P35244 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.45■□□□□ 0.7
RPA3P35244 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.45■□□□□ 0.7
RPA3P35244 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.45■□□□□ 0.7
RPA3P35244 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.45■□□□□ 0.7
RPA3P35244 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.45■□□□□ 0.7
RPA3P35244 AL390961.4-201ENST00000623958 2535 ntBASIC19.45■□□□□ 0.7
RPA3P35244 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RPA3P35244 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.45■□□□□ 0.7
RPA3P35244 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
RPA3P35244 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.45■□□□□ 0.7
RPA3P35244 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC19.45■□□□□ 0.7
RPA3P35244 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.45■□□□□ 0.7
RPA3P35244 AC083880.1-201ENST00000608266 535 ntBASIC19.45■□□□□ 0.7
RPA3P35244 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPA3P35244 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.45■□□□□ 0.7
RPA3P35244 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.45■□□□□ 0.7
RPA3P35244 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPA3P35244 AC135050.7-201ENST00000624508 2218 ntBASIC19.45■□□□□ 0.7
RPA3P35244 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
RPA3P35244 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.45■□□□□ 0.7
RPA3P35244 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPA3P35244 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RPA3P35244 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC19.45■□□□□ 0.7
RPA3P35244 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RPA3P35244 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.45■□□□□ 0.7
RPA3P35244 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RPA3P35244 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPA3P35244 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.44■□□□□ 0.7
RPA3P35244 AC020763.4-201ENST00000623414 4170 ntBASIC19.44■□□□□ 0.7
RPA3P35244 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPA3P35244 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPA3P35244 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPA3P35244 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPA3P35244 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RPA3P35244 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPA3P35244 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPA3P35244 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPA3P35244 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPA3P35244 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPA3P35244 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPA3P35244 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.44■□□□□ 0.7
RPA3P35244 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.44■□□□□ 0.7
RPA3P35244 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.44■□□□□ 0.7
RPA3P35244 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RPA3P35244 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPA3P35244 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RPA3P35244 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RPA3P35244 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RPA3P35244 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPA3P35244 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPA3P35244 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPA3P35244 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.43■□□□□ 0.7
RPA3P35244 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
RPA3P35244 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPA3P35244 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.43■□□□□ 0.7
RPA3P35244 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RPA3P35244 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPA3P35244 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPA3P35244 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPA3P35244 WIZP1-201ENST00000531444 2299 ntBASIC19.43■□□□□ 0.7
RPA3P35244 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RPA3P35244 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RPA3P35244 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.43■□□□□ 0.7
RPA3P35244 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.43■□□□□ 0.7
RPA3P35244 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.43■□□□□ 0.7
RPA3P35244 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms