Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.93■□□□□ 0.78
PTPN7P35236 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.93■□□□□ 0.78
PTPN7P35236 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN7P35236 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN7P35236 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN7P35236 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.93■□□□□ 0.78
PTPN7P35236 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN7P35236 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN7P35236 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PTPN7P35236 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PTPN7P35236 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.93■□□□□ 0.78
PTPN7P35236 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.93■□□□□ 0.78
PTPN7P35236 AC092666.2-201ENST00000613287 246 ntBASIC19.93■□□□□ 0.78
PTPN7P35236 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.93■□□□□ 0.78
PTPN7P35236 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.93■□□□□ 0.78
PTPN7P35236 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.93■□□□□ 0.78
PTPN7P35236 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN7P35236 RNF165-205ENST00000588679 2904 ntBASIC19.93■□□□□ 0.78
PTPN7P35236 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN7P35236 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN7P35236 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN7P35236 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PTPN7P35236 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.93■□□□□ 0.78
PTPN7P35236 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PTPN7P35236 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN7P35236 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN7P35236 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PTPN7P35236 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PTPN7P35236 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN7P35236 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN7P35236 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN7P35236 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN7P35236 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.92■□□□□ 0.78
PTPN7P35236 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN7P35236 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN7P35236 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.92■□□□□ 0.78
PTPN7P35236 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.92■□□□□ 0.78
PTPN7P35236 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.92■□□□□ 0.78
PTPN7P35236 AC008403.3-201ENST00000598924 454 ntBASIC19.92■□□□□ 0.78
PTPN7P35236 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN7P35236 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN7P35236 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN7P35236 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.92■□□□□ 0.78
PTPN7P35236 AL031598.1-201ENST00000561511 1773 ntBASIC19.92■□□□□ 0.78
PTPN7P35236 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN7P35236 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN7P35236 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.92■□□□□ 0.78
PTPN7P35236 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.92■□□□□ 0.78
PTPN7P35236 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN7P35236 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN7P35236 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN7P35236 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN7P35236 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
PTPN7P35236 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTPN7P35236 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN7P35236 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN7P35236 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN7P35236 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.91■□□□□ 0.78
PTPN7P35236 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
PTPN7P35236 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN7P35236 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN7P35236 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN7P35236 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN7P35236 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.91■□□□□ 0.78
PTPN7P35236 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN7P35236 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.91■□□□□ 0.78
PTPN7P35236 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.91■□□□□ 0.78
PTPN7P35236 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN7P35236 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.91■□□□□ 0.78
PTPN7P35236 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.91■□□□□ 0.78
PTPN7P35236 AC090192.1-201ENST00000517740 490 ntBASIC19.91■□□□□ 0.78
PTPN7P35236 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN7P35236 C1QL1P1-201ENST00000568105 661 ntBASIC19.91■□□□□ 0.78
PTPN7P35236 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PTPN7P35236 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PTPN7P35236 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.91■□□□□ 0.78
PTPN7P35236 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
PTPN7P35236 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN7P35236 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
PTPN7P35236 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTPN7P35236 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PTPN7P35236 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 PRKY-204ENST00000533551 1019 ntBASIC19.9■□□□□ 0.78
PTPN7P35236 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.9■□□□□ 0.78
PTPN7P35236 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTPN7P35236 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PTPN7P35236 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms