Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
SLC6A4P31645 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC6A4P31645 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC6A4P31645 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
SLC6A4P31645 Z82202.1-201ENST00000623446 1880 ntBASIC19.82■□□□□ 0.76
SLC6A4P31645 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A4P31645 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A4P31645 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SLC6A4P31645 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A4P31645 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A4P31645 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A4P31645 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC6A4P31645 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A4P31645 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A4P31645 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC19.81■□□□□ 0.76
SLC6A4P31645 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A4P31645 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A4P31645 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A4P31645 AC145285.6-201ENST00000604632 637 ntBASIC19.81■□□□□ 0.76
SLC6A4P31645 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
SLC6A4P31645 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A4P31645 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SLC6A4P31645 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.81■□□□□ 0.76
SLC6A4P31645 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC6A4P31645 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.8■□□□□ 0.76
SLC6A4P31645 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A4P31645 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC6A4P31645 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A4P31645 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC6A4P31645 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC6A4P31645 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A4P31645 KRT8P11-201ENST00000409686 1436 ntBASIC19.8■□□□□ 0.76
SLC6A4P31645 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC6A4P31645 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A4P31645 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A4P31645 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC6A4P31645 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A4P31645 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC6A4P31645 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A4P31645 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC6A4P31645 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A4P31645 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A4P31645 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.8■□□□□ 0.76
SLC6A4P31645 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC6A4P31645 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A4P31645 LINC01568-207ENST00000641790 1380 ntBASIC19.8■□□□□ 0.76
SLC6A4P31645 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.8■□□□□ 0.76
SLC6A4P31645 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
SLC6A4P31645 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A4P31645 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A4P31645 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.79■□□□□ 0.76
SLC6A4P31645 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A4P31645 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A4P31645 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC6A4P31645 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SLC6A4P31645 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC6A4P31645 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC6A4P31645 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A4P31645 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC6A4P31645 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A4P31645 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SLC6A4P31645 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.79■□□□□ 0.76
SLC6A4P31645 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.79■□□□□ 0.76
SLC6A4P31645 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC6A4P31645 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A4P31645 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC6A4P31645 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A4P31645 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A4P31645 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SLC6A4P31645 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SLC6A4P31645 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC6A4P31645 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
SLC6A4P31645 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.79■□□□□ 0.76
SLC6A4P31645 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A4P31645 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A4P31645 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC6A4P31645 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A4P31645 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC6A4P31645 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A4P31645 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A4P31645 INGX-201ENST00000359239 846 ntBASIC19.78■□□□□ 0.76
SLC6A4P31645 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
SLC6A4P31645 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A4P31645 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.78■□□□□ 0.76
SLC6A4P31645 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.78■□□□□ 0.76
SLC6A4P31645 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
SLC6A4P31645 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A4P31645 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.78■□□□□ 0.76
SLC6A4P31645 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC6A4P31645 CKBP1-201ENST00000565489 1086 ntBASIC19.78■□□□□ 0.76
SLC6A4P31645 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
SLC6A4P31645 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.78■□□□□ 0.76
SLC6A4P31645 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A4P31645 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.78■□□□□ 0.76
SLC6A4P31645 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.78■□□□□ 0.76
SLC6A4P31645 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SLC6A4P31645 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A4P31645 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.78■□□□□ 0.76
SLC6A4P31645 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SLC6A4P31645 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms