Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
SHC1P29353 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SHC1P29353 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.65■□□□□ 0.42
SHC1P29353 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC1P29353 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.65■□□□□ 0.42
SHC1P29353 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
SHC1P29353 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHC1P29353 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SHC1P29353 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC1P29353 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHC1P29353 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC1P29353 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHC1P29353 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHC1P29353 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.65■□□□□ 0.42
SHC1P29353 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.65■□□□□ 0.42
SHC1P29353 YBX1P10-201ENST00000444752 975 ntBASIC17.65■□□□□ 0.42
SHC1P29353 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC1P29353 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
SHC1P29353 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.65■□□□□ 0.42
SHC1P29353 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC17.65■□□□□ 0.42
SHC1P29353 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.65■□□□□ 0.42
SHC1P29353 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SHC1P29353 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHC1P29353 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SHC1P29353 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.65■□□□□ 0.42
SHC1P29353 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.65■□□□□ 0.42
SHC1P29353 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.65■□□□□ 0.42
SHC1P29353 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.65■□□□□ 0.42
SHC1P29353 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC1P29353 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.65■□□□□ 0.42
SHC1P29353 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC1P29353 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHC1P29353 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SHC1P29353 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SHC1P29353 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
SHC1P29353 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.64■□□□□ 0.42
SHC1P29353 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.64■□□□□ 0.42
SHC1P29353 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SHC1P29353 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC17.64■□□□□ 0.42
SHC1P29353 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SHC1P29353 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
SHC1P29353 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
SHC1P29353 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC1P29353 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SHC1P29353 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.64■□□□□ 0.41
SHC1P29353 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.64■□□□□ 0.41
SHC1P29353 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC1P29353 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC1P29353 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC1P29353 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHC1P29353 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.64■□□□□ 0.41
SHC1P29353 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.64■□□□□ 0.41
SHC1P29353 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.64■□□□□ 0.41
SHC1P29353 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC1P29353 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC1P29353 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC1P29353 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC1P29353 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SHC1P29353 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC1P29353 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.64■□□□□ 0.41
SHC1P29353 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC1P29353 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.64■□□□□ 0.41
SHC1P29353 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC1P29353 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SHC1P29353 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SHC1P29353 AC093503.3-201ENST00000624917 2352 ntBASIC17.64■□□□□ 0.41
SHC1P29353 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHC1P29353 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHC1P29353 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC17.63■□□□□ 0.41
SHC1P29353 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC17.63■□□□□ 0.41
SHC1P29353 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHC1P29353 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHC1P29353 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.63■□□□□ 0.41
SHC1P29353 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
SHC1P29353 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.63■□□□□ 0.41
SHC1P29353 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHC1P29353 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
SHC1P29353 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHC1P29353 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
SHC1P29353 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.63■□□□□ 0.41
SHC1P29353 KRT18P16-201ENST00000510337 1294 ntBASIC17.63■□□□□ 0.41
SHC1P29353 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.63■□□□□ 0.41
SHC1P29353 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.63■□□□□ 0.41
SHC1P29353 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.63■□□□□ 0.41
SHC1P29353 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHC1P29353 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.63■□□□□ 0.41
SHC1P29353 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHC1P29353 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHC1P29353 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SHC1P29353 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SHC1P29353 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SHC1P29353 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC1P29353 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC1P29353 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
SHC1P29353 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SHC1P29353 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC1P29353 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC1P29353 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC1P29353 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
SHC1P29353 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms