Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATF1P18846 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATF1P18846 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.91■□□□□ 0.3
ATF1P18846 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.91■□□□□ 0.3
ATF1P18846 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.91■□□□□ 0.3
ATF1P18846 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATF1P18846 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATF1P18846 AC080038.1-201ENST00000611274 1154 ntBASIC16.91■□□□□ 0.3
ATF1P18846 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATF1P18846 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.91■□□□□ 0.3
ATF1P18846 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATF1P18846 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATF1P18846 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
ATF1P18846 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATF1P18846 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATF1P18846 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
ATF1P18846 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
ATF1P18846 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC16.91■□□□□ 0.3
ATF1P18846 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
ATF1P18846 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
ATF1P18846 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
ATF1P18846 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATF1P18846 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATF1P18846 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATF1P18846 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATF1P18846 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.9■□□□□ 0.3
ATF1P18846 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATF1P18846 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.9■□□□□ 0.3
ATF1P18846 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATF1P18846 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
ATF1P18846 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATF1P18846 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATF1P18846 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATF1P18846 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC16.9■□□□□ 0.3
ATF1P18846 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.9■□□□□ 0.3
ATF1P18846 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.9■□□□□ 0.3
ATF1P18846 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.9■□□□□ 0.3
ATF1P18846 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC16.9■□□□□ 0.3
ATF1P18846 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
ATF1P18846 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.9■□□□□ 0.3
ATF1P18846 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.9■□□□□ 0.3
ATF1P18846 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
ATF1P18846 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATF1P18846 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
ATF1P18846 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATF1P18846 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATF1P18846 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
ATF1P18846 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATF1P18846 MKRN4P-201ENST00000444706 1521 ntBASIC16.9■□□□□ 0.3
ATF1P18846 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.9■□□□□ 0.3
ATF1P18846 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
ATF1P18846 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
ATF1P18846 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
ATF1P18846 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ATF1P18846 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
ATF1P18846 FP475955.4-201ENST00000623131 1990 ntBASIC16.89■□□□□ 0.3
ATF1P18846 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
ATF1P18846 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATF1P18846 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC16.89■□□□□ 0.29
ATF1P18846 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATF1P18846 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.89■□□□□ 0.29
ATF1P18846 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ATF1P18846 AC018553.1-201ENST00000616682 1458 ntBASIC16.89■□□□□ 0.29
ATF1P18846 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.89■□□□□ 0.29
ATF1P18846 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATF1P18846 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.89■□□□□ 0.29
ATF1P18846 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
ATF1P18846 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATF1P18846 AF201337.1-201ENST00000520239 748 ntBASIC16.89■□□□□ 0.29
ATF1P18846 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.89■□□□□ 0.29
ATF1P18846 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.89■□□□□ 0.29
ATF1P18846 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ATF1P18846 AC105036.2-201ENST00000569468 176 ntBASIC16.89■□□□□ 0.29
ATF1P18846 AC073111.5-205ENST00000641717 521 ntBASIC16.89■□□□□ 0.29
ATF1P18846 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATF1P18846 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATF1P18846 BICD1-207ENST00000551848 1962 ntBASIC16.89■□□□□ 0.29
ATF1P18846 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.89■□□□□ 0.29
ATF1P18846 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.89■□□□□ 0.29
ATF1P18846 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
ATF1P18846 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
ATF1P18846 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATF1P18846 AC093525.10-201ENST00000625130 1569 ntBASIC16.89■□□□□ 0.29
ATF1P18846 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.89■□□□□ 0.29
ATF1P18846 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ATF1P18846 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
ATF1P18846 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATF1P18846 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATF1P18846 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
ATF1P18846 LTB4R2-202ENST00000528054 3092 ntBASIC16.88■□□□□ 0.29
ATF1P18846 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
ATF1P18846 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.88■□□□□ 0.29
ATF1P18846 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ATF1P18846 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.88■□□□□ 0.29
ATF1P18846 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.88■□□□□ 0.29
ATF1P18846 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms