Protein–RNA interactions for Protein: P18077

RPL35A, 60S ribosomal protein L35a, humanhuman

Known RBP Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35AP18077 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RPL35AP18077 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.35□□□□□ -0.11
RPL35AP18077 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPL35AP18077 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL35AP18077 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL35AP18077 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPL35AP18077 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL35AP18077 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL35AP18077 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL35AP18077 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.35□□□□□ -0.11
RPL35AP18077 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL35AP18077 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC14.35□□□□□ -0.11
RPL35AP18077 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL35AP18077 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL35AP18077 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL35AP18077 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPL35AP18077 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL35AP18077 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RPL35AP18077 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
RPL35AP18077 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL35AP18077 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL35AP18077 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RPL35AP18077 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPL35AP18077 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL35AP18077 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC14.34□□□□□ -0.11
RPL35AP18077 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPL35AP18077 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL35AP18077 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RPL35AP18077 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL35AP18077 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL35AP18077 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL35AP18077 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RPL35AP18077 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.34□□□□□ -0.11
RPL35AP18077 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC14.34□□□□□ -0.11
RPL35AP18077 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPL35AP18077 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.34□□□□□ -0.11
RPL35AP18077 AP003071.4-201ENST00000562276 1284 ntBASIC14.34□□□□□ -0.11
RPL35AP18077 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
RPL35AP18077 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.34□□□□□ -0.11
RPL35AP18077 AL353708.3-201ENST00000610272 989 ntBASIC14.34□□□□□ -0.11
RPL35AP18077 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC14.34□□□□□ -0.11
RPL35AP18077 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RPL35AP18077 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RPL35AP18077 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL35AP18077 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL35AP18077 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPL35AP18077 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL35AP18077 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.34□□□□□ -0.11
RPL35AP18077 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
RPL35AP18077 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL35AP18077 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.34□□□□□ -0.11
RPL35AP18077 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL35AP18077 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL35AP18077 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC14.34□□□□□ -0.11
RPL35AP18077 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RPL35AP18077 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
RPL35AP18077 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RPL35AP18077 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.34□□□□□ -0.11
RPL35AP18077 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RPL35AP18077 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.11
RPL35AP18077 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.33□□□□□ -0.11
RPL35AP18077 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.11
RPL35AP18077 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RPL35AP18077 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RPL35AP18077 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.33□□□□□ -0.11
RPL35AP18077 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RPL35AP18077 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RPL35AP18077 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC14.33□□□□□ -0.11
RPL35AP18077 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
RPL35AP18077 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RPL35AP18077 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
RPL35AP18077 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL35AP18077 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC14.33□□□□□ -0.12
RPL35AP18077 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL35AP18077 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPL35AP18077 PKD1P1-201ENST00000458669 6805 ntBASIC14.33□□□□□ -0.12
RPL35AP18077 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL35AP18077 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL35AP18077 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL35AP18077 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPL35AP18077 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.33□□□□□ -0.12
RPL35AP18077 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL35AP18077 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.33□□□□□ -0.12
RPL35AP18077 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL35AP18077 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RPL35AP18077 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RPL35AP18077 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC14.33□□□□□ -0.12
RPL35AP18077 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL35AP18077 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL35AP18077 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
RPL35AP18077 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RPL35AP18077 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC14.33□□□□□ -0.12
RPL35AP18077 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL35AP18077 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
RPL35AP18077 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RPL35AP18077 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RPL35AP18077 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RPL35AP18077 MED17-221ENST00000639724 2317 ntTSL 5 BASIC14.32□□□□□ -0.12
RPL35AP18077 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC14.32□□□□□ -0.12
RPL35AP18077 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms