Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL11A1P12107 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.96■■□□□ 1.11
COL11A1P12107 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.96■■□□□ 1.11
COL11A1P12107 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
COL11A1P12107 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL11A1P12107 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL11A1P12107 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL11A1P12107 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
COL11A1P12107 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
COL11A1P12107 ZNF444P1-201ENST00000559497 298 ntBASIC21.95■■□□□ 1.1
COL11A1P12107 CR769767.2-201ENST00000622735 460 ntBASIC21.95■■□□□ 1.1
COL11A1P12107 AC093458.2-201ENST00000623150 629 ntBASIC21.95■■□□□ 1.1
COL11A1P12107 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.95■■□□□ 1.1
COL11A1P12107 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
COL11A1P12107 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.95■■□□□ 1.1
COL11A1P12107 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
COL11A1P12107 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.95■■□□□ 1.1
COL11A1P12107 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
COL11A1P12107 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL11A1P12107 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.94■■□□□ 1.1
COL11A1P12107 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL11A1P12107 AC091076.1-201ENST00000610741 619 ntBASIC21.94■■□□□ 1.1
COL11A1P12107 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.94■■□□□ 1.1
COL11A1P12107 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.94■■□□□ 1.1
COL11A1P12107 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.94■■□□□ 1.1
COL11A1P12107 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL11A1P12107 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL11A1P12107 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.94■■□□□ 1.1
COL11A1P12107 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.94■■□□□ 1.1
COL11A1P12107 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL11A1P12107 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL11A1P12107 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL11A1P12107 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
COL11A1P12107 SPDYE13P-201ENST00000445314 798 ntBASIC21.94■■□□□ 1.1
COL11A1P12107 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.94■■□□□ 1.1
COL11A1P12107 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21.94■■□□□ 1.1
COL11A1P12107 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
COL11A1P12107 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.94■■□□□ 1.1
COL11A1P12107 SDHAP1-207ENST00000440850 2000 ntBASIC21.94■■□□□ 1.1
COL11A1P12107 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL11A1P12107 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
COL11A1P12107 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
COL11A1P12107 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.93■■□□□ 1.1
COL11A1P12107 GAS2L1P1-201ENST00000420145 1480 ntBASIC21.93■■□□□ 1.1
COL11A1P12107 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
COL11A1P12107 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL11A1P12107 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.93■■□□□ 1.1
COL11A1P12107 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL11A1P12107 HBZP1-201ENST00000354915 429 ntBASIC21.93■■□□□ 1.1
COL11A1P12107 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL11A1P12107 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL11A1P12107 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC21.93■■□□□ 1.1
COL11A1P12107 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.93■■□□□ 1.1
COL11A1P12107 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
COL11A1P12107 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL11A1P12107 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
COL11A1P12107 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL11A1P12107 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
COL11A1P12107 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL11A1P12107 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.93■■□□□ 1.1
COL11A1P12107 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
COL11A1P12107 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
COL11A1P12107 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL11A1P12107 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL11A1P12107 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL11A1P12107 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL11A1P12107 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL11A1P12107 AP000523.1-201ENST00000398242 1049 ntBASIC21.92■■□□□ 1.1
COL11A1P12107 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL11A1P12107 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC21.92■■□□□ 1.1
COL11A1P12107 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.92■■□□□ 1.1
COL11A1P12107 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC21.92■■□□□ 1.1
COL11A1P12107 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.92■■□□□ 1.1
COL11A1P12107 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL11A1P12107 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC21.92■■□□□ 1.1
COL11A1P12107 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.92■■□□□ 1.1
COL11A1P12107 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL11A1P12107 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL11A1P12107 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.92■■□□□ 1.1
COL11A1P12107 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.92■■□□□ 1.1
COL11A1P12107 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL11A1P12107 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
COL11A1P12107 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL11A1P12107 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.92■■□□□ 1.1
COL11A1P12107 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
COL11A1P12107 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
COL11A1P12107 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.92■■□□□ 1.1
COL11A1P12107 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.92■■□□□ 1.1
COL11A1P12107 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.92■■□□□ 1.1
COL11A1P12107 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.92■■□□□ 1.1
COL11A1P12107 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.92■■□□□ 1.1
COL11A1P12107 MIR4674-201ENST00000582457 87 ntBASIC21.92■■□□□ 1.1
COL11A1P12107 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.92■■□□□ 1.1
COL11A1P12107 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
COL11A1P12107 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL11A1P12107 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.91■■□□□ 1.1
COL11A1P12107 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.91■■□□□ 1.1
COL11A1P12107 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
COL11A1P12107 HCG4P8-203ENST00000443049 980 ntBASIC21.91■■□□□ 1.1
COL11A1P12107 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.91■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms