Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT3P12035 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
KRT3P12035 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT3P12035 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT3P12035 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT3P12035 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.29■□□□□ 0.84
KRT3P12035 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
KRT3P12035 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
KRT3P12035 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.29■□□□□ 0.84
KRT3P12035 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT3P12035 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.29■□□□□ 0.84
KRT3P12035 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT3P12035 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT3P12035 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT3P12035 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT3P12035 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT3P12035 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.29■□□□□ 0.84
KRT3P12035 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
KRT3P12035 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
KRT3P12035 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
KRT3P12035 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT3P12035 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.29■□□□□ 0.84
KRT3P12035 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT3P12035 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT3P12035 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT3P12035 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT3P12035 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT3P12035 AC141586.3-201ENST00000562166 1838 ntBASIC20.28■□□□□ 0.84
KRT3P12035 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT3P12035 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT3P12035 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
KRT3P12035 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT3P12035 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT3P12035 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT3P12035 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT3P12035 HLA-A-209ENST00000638375 975 ntBASIC20.28■□□□□ 0.84
KRT3P12035 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT3P12035 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.28■□□□□ 0.84
KRT3P12035 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.28■□□□□ 0.84
KRT3P12035 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT3P12035 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT3P12035 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
KRT3P12035 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT3P12035 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
KRT3P12035 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
KRT3P12035 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.27■□□□□ 0.84
KRT3P12035 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT3P12035 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.27■□□□□ 0.84
KRT3P12035 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT3P12035 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT3P12035 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
KRT3P12035 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT3P12035 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT3P12035 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT3P12035 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
KRT3P12035 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT3P12035 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
KRT3P12035 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KRT3P12035 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KRT3P12035 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT3P12035 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT3P12035 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.27■□□□□ 0.84
KRT3P12035 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
KRT3P12035 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT3P12035 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.27■□□□□ 0.84
KRT3P12035 KRT18P29-201ENST00000397031 1267 ntBASIC20.27■□□□□ 0.84
KRT3P12035 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.27■□□□□ 0.84
KRT3P12035 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KRT3P12035 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.27■□□□□ 0.84
KRT3P12035 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
KRT3P12035 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.27■□□□□ 0.84
KRT3P12035 RPPH1-201ENST00000516869 333 ntBASIC20.27■□□□□ 0.84
KRT3P12035 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.27■□□□□ 0.84
KRT3P12035 ITM2C-210ENST00000620962 501 ntBASIC20.27■□□□□ 0.84
KRT3P12035 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.27■□□□□ 0.84
KRT3P12035 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
KRT3P12035 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
KRT3P12035 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.27■□□□□ 0.84
KRT3P12035 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT3P12035 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
KRT3P12035 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
KRT3P12035 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KRT3P12035 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.27■□□□□ 0.83
KRT3P12035 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
KRT3P12035 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
KRT3P12035 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT3P12035 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC20.26■□□□□ 0.83
KRT3P12035 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT3P12035 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT3P12035 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
KRT3P12035 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT3P12035 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT3P12035 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.26■□□□□ 0.83
KRT3P12035 AP000974.1-201ENST00000623909 2387 ntBASIC20.26■□□□□ 0.83
KRT3P12035 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT3P12035 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
KRT3P12035 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
KRT3P12035 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
KRT3P12035 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
KRT3P12035 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms