Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 MIR572-201ENST00000384983 95 ntBASIC14.94□□□□□ -0.02
CXCL1P09341 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.94□□□□□ -0.02
CXCL1P09341 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.94□□□□□ -0.02
CXCL1P09341 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.94□□□□□ -0.02
CXCL1P09341 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.94□□□□□ -0.02
CXCL1P09341 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
CXCL1P09341 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CXCL1P09341 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CXCL1P09341 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCL1P09341 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.93□□□□□ -0.02
CXCL1P09341 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCL1P09341 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CXCL1P09341 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CXCL1P09341 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14.93□□□□□ -0.02
CXCL1P09341 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCL1P09341 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCL1P09341 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCL1P09341 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCL1P09341 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
CXCL1P09341 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CXCL1P09341 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
CXCL1P09341 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCL1P09341 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCL1P09341 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CXCL1P09341 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.93□□□□□ -0.02
CXCL1P09341 AC027682.1-201ENST00000562846 899 ntBASIC14.93□□□□□ -0.02
CXCL1P09341 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCL1P09341 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CXCL1P09341 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CXCL1P09341 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CXCL1P09341 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.93□□□□□ -0.02
CXCL1P09341 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
CXCL1P09341 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CXCL1P09341 AL391005.1-201ENST00000623953 2435 ntBASIC14.93□□□□□ -0.02
CXCL1P09341 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CXCL1P09341 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CXCL1P09341 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CXCL1P09341 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CXCL1P09341 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CXCL1P09341 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.93□□□□□ -0.02
CXCL1P09341 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 TSPY26P-201ENST00000476365 1326 ntBASIC14.92□□□□□ -0.02
CXCL1P09341 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.92□□□□□ -0.02
CXCL1P09341 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC14.92□□□□□ -0.02
CXCL1P09341 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.92□□□□□ -0.02
CXCL1P09341 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC14.92□□□□□ -0.02
CXCL1P09341 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.92□□□□□ -0.02
CXCL1P09341 UNC93B3-201ENST00000308076 687 ntBASIC14.92□□□□□ -0.02
CXCL1P09341 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.92□□□□□ -0.02
CXCL1P09341 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
CXCL1P09341 AC120498.10-201ENST00000621827 505 ntBASIC14.92□□□□□ -0.02
CXCL1P09341 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC14.92□□□□□ -0.02
CXCL1P09341 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.92□□□□□ -0.02
CXCL1P09341 AC116050.2-201ENST00000612102 1779 ntBASIC14.92□□□□□ -0.02
CXCL1P09341 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
CXCL1P09341 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC14.92□□□□□ -0.02
CXCL1P09341 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.92□□□□□ -0.02
CXCL1P09341 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CXCL1P09341 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CXCL1P09341 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC14.92□□□□□ -0.02
CXCL1P09341 MPST-204ENST00000404393 1329 ntTSL 5 BASIC14.92□□□□□ -0.02
CXCL1P09341 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL1P09341 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL1P09341 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
CXCL1P09341 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
CXCL1P09341 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms