Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND1P03886 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
MT-ND1P03886 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND1P03886 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND1P03886 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
MT-ND1P03886 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND1P03886 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND1P03886 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
MT-ND1P03886 KRT18P68-201ENST00000392293 1000 ntBASIC18.17■□□□□ 0.5
MT-ND1P03886 AL162430.1-201ENST00000480705 870 ntBASIC18.17■□□□□ 0.5
MT-ND1P03886 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.17■□□□□ 0.5
MT-ND1P03886 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.17■□□□□ 0.5
MT-ND1P03886 MIR5787-201ENST00000611784 55 ntBASIC18.17■□□□□ 0.5
MT-ND1P03886 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.17■□□□□ 0.5
MT-ND1P03886 PARP1-210ENST00000629232 477 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-ND1P03886 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-ND1P03886 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND1P03886 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND1P03886 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND1P03886 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND1P03886 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
MT-ND1P03886 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
MT-ND1P03886 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND1P03886 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND1P03886 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
MT-ND1P03886 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.17■□□□□ 0.5
MT-ND1P03886 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.17■□□□□ 0.5
MT-ND1P03886 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MT-ND1P03886 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.17■□□□□ 0.5
MT-ND1P03886 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
MT-ND1P03886 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.16■□□□□ 0.5
MT-ND1P03886 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.16■□□□□ 0.5
MT-ND1P03886 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND1P03886 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
MT-ND1P03886 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.16■□□□□ 0.5
MT-ND1P03886 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND1P03886 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND1P03886 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND1P03886 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.16■□□□□ 0.5
MT-ND1P03886 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND1P03886 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND1P03886 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND1P03886 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND1P03886 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND1P03886 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND1P03886 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND1P03886 CYP2T1P-201ENST00000432607 1285 ntBASIC18.16■□□□□ 0.5
MT-ND1P03886 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
MT-ND1P03886 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.16■□□□□ 0.5
MT-ND1P03886 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.16■□□□□ 0.5
MT-ND1P03886 AC008694.1-202ENST00000636953 945 ntBASIC18.16■□□□□ 0.5
MT-ND1P03886 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND1P03886 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND1P03886 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND1P03886 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.16■□□□□ 0.5
MT-ND1P03886 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.16■□□□□ 0.5
MT-ND1P03886 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
MT-ND1P03886 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND1P03886 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.16■□□□□ 0.5
MT-ND1P03886 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND1P03886 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND1P03886 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
MT-ND1P03886 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.16■□□□□ 0.5
MT-ND1P03886 AC090164.3-201ENST00000610780 2143 ntBASIC18.16■□□□□ 0.5
MT-ND1P03886 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.16■□□□□ 0.5
MT-ND1P03886 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND1P03886 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.15■□□□□ 0.5
MT-ND1P03886 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND1P03886 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND1P03886 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
MT-ND1P03886 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.15■□□□□ 0.5
MT-ND1P03886 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND1P03886 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND1P03886 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND1P03886 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND1P03886 AC007322.1-201ENST00000426983 750 ntBASIC18.15■□□□□ 0.5
MT-ND1P03886 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.15■□□□□ 0.5
MT-ND1P03886 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.15■□□□□ 0.5
MT-ND1P03886 CYP2T3P-201ENST00000601990 817 ntBASIC18.15■□□□□ 0.5
MT-ND1P03886 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.15■□□□□ 0.5
MT-ND1P03886 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
MT-ND1P03886 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND1P03886 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND1P03886 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND1P03886 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
MT-ND1P03886 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.15■□□□□ 0.5
MT-ND1P03886 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
MT-ND1P03886 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
MT-ND1P03886 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.15■□□□□ 0.5
MT-ND1P03886 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
MT-ND1P03886 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.14■□□□□ 0.5
MT-ND1P03886 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
MT-ND1P03886 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.14■□□□□ 0.49
MT-ND1P03886 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.14■□□□□ 0.49
MT-ND1P03886 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.14■□□□□ 0.49
MT-ND1P03886 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
MT-ND1P03886 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.14■□□□□ 0.49
MT-ND1P03886 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.14■□□□□ 0.49
MT-ND1P03886 MDK-213ENST00000617138 635 ntTSL 2 BASIC18.14■□□□□ 0.49
MT-ND1P03886 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms