Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 SIRPAP1-201ENST00000448467 1770 ntBASIC14.49□□□□□ -0.09
HLA-DQA1P01909 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.49□□□□□ -0.09
HLA-DQA1P01909 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 SNX3-202ENST00000349379 890 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 AC099791.1-201ENST00000416440 715 ntBASIC14.48□□□□□ -0.09
HLA-DQA1P01909 PTPA-214ENST00000423100 988 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.48□□□□□ -0.09
HLA-DQA1P01909 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 FP475955.4-201ENST00000623131 1990 ntBASIC14.47□□□□□ -0.09
HLA-DQA1P01909 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 EDA-201ENST00000338901 1233 ntBASIC14.47□□□□□ -0.09
HLA-DQA1P01909 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-DQA1P01909 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 AF213884.3-201ENST00000563833 479 ntBASIC14.46□□□□□ -0.09
HLA-DQA1P01909 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HLA-DQA1P01909 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms