Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TOP3BO95985 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.72■□□□□ 0.75
TOP3BO95985 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.72■□□□□ 0.75
TOP3BO95985 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TOP3BO95985 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TOP3BO95985 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TOP3BO95985 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TOP3BO95985 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TOP3BO95985 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TOP3BO95985 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TOP3BO95985 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TOP3BO95985 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TOP3BO95985 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TOP3BO95985 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TOP3BO95985 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TOP3BO95985 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TOP3BO95985 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TOP3BO95985 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TOP3BO95985 AC009237.14-201ENST00000609975 1594 ntBASIC19.71■□□□□ 0.75
TOP3BO95985 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
TOP3BO95985 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TOP3BO95985 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TOP3BO95985 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.71■□□□□ 0.75
TOP3BO95985 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.71■□□□□ 0.75
TOP3BO95985 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.71■□□□□ 0.75
TOP3BO95985 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.71■□□□□ 0.75
TOP3BO95985 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.71■□□□□ 0.75
TOP3BO95985 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.71■□□□□ 0.75
TOP3BO95985 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
TOP3BO95985 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TOP3BO95985 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TOP3BO95985 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TOP3BO95985 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TOP3BO95985 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TOP3BO95985 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TOP3BO95985 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TOP3BO95985 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
TOP3BO95985 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TOP3BO95985 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.74
TOP3BO95985 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.7■□□□□ 0.74
TOP3BO95985 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP3BO95985 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TOP3BO95985 KRT8P17-201ENST00000453110 1448 ntBASIC19.7■□□□□ 0.74
TOP3BO95985 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.7■□□□□ 0.74
TOP3BO95985 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP3BO95985 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.7■□□□□ 0.74
TOP3BO95985 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP3BO95985 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TOP3BO95985 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.7■□□□□ 0.74
TOP3BO95985 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.7■□□□□ 0.74
TOP3BO95985 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.7■□□□□ 0.74
TOP3BO95985 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.7■□□□□ 0.74
TOP3BO95985 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.7■□□□□ 0.74
TOP3BO95985 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.7■□□□□ 0.74
TOP3BO95985 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP3BO95985 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP3BO95985 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP3BO95985 Z82202.1-201ENST00000623446 1880 ntBASIC19.7■□□□□ 0.74
TOP3BO95985 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.7■□□□□ 0.74
TOP3BO95985 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP3BO95985 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP3BO95985 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.7■□□□□ 0.74
TOP3BO95985 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP3BO95985 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP3BO95985 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TOP3BO95985 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TOP3BO95985 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.7■□□□□ 0.74
TOP3BO95985 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TOP3BO95985 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TOP3BO95985 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TOP3BO95985 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TOP3BO95985 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TOP3BO95985 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TOP3BO95985 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TOP3BO95985 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TOP3BO95985 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TOP3BO95985 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TOP3BO95985 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TOP3BO95985 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TOP3BO95985 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TOP3BO95985 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TOP3BO95985 AC113347.1-201ENST00000413321 391 ntBASIC19.69■□□□□ 0.74
TOP3BO95985 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.69■□□□□ 0.74
TOP3BO95985 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
TOP3BO95985 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.69■□□□□ 0.74
TOP3BO95985 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TOP3BO95985 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.69■□□□□ 0.74
TOP3BO95985 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.69■□□□□ 0.74
TOP3BO95985 DUT-205ENST00000558813 769 ntTSL 2 BASIC19.69■□□□□ 0.74
TOP3BO95985 AC087388.1-201ENST00000571370 1112 ntBASIC19.69■□□□□ 0.74
TOP3BO95985 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.69■□□□□ 0.74
TOP3BO95985 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.69■□□□□ 0.74
TOP3BO95985 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TOP3BO95985 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.69■□□□□ 0.74
TOP3BO95985 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TOP3BO95985 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TOP3BO95985 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.69■□□□□ 0.74
TOP3BO95985 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.69■□□□□ 0.74
TOP3BO95985 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TOP3BO95985 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms