Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN1O95832 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN1O95832 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN1O95832 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN1O95832 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN1O95832 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN1O95832 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN1O95832 ATP5G2P1-201ENST00000433580 426 ntBASIC17.19■□□□□ 0.34
CLDN1O95832 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN1O95832 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
CLDN1O95832 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.19■□□□□ 0.34
CLDN1O95832 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CLDN1O95832 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CLDN1O95832 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
CLDN1O95832 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CLDN1O95832 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CLDN1O95832 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN1O95832 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN1O95832 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN1O95832 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CLDN1O95832 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.19■□□□□ 0.34
CLDN1O95832 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN1O95832 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CLDN1O95832 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLDN1O95832 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CLDN1O95832 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.19■□□□□ 0.34
CLDN1O95832 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN1O95832 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN1O95832 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN1O95832 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.18■□□□□ 0.34
CLDN1O95832 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.18■□□□□ 0.34
CLDN1O95832 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN1O95832 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CLDN1O95832 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN1O95832 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN1O95832 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN1O95832 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLDN1O95832 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLDN1O95832 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN1O95832 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN1O95832 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN1O95832 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN1O95832 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN1O95832 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN1O95832 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN1O95832 AC004951.3-201ENST00000418645 1148 ntBASIC17.18■□□□□ 0.34
CLDN1O95832 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CLDN1O95832 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.18■□□□□ 0.34
CLDN1O95832 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.18■□□□□ 0.34
CLDN1O95832 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.18■□□□□ 0.34
CLDN1O95832 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.18■□□□□ 0.34
CLDN1O95832 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.18■□□□□ 0.34
CLDN1O95832 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CLDN1O95832 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.18■□□□□ 0.34
CLDN1O95832 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.18■□□□□ 0.34
CLDN1O95832 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN1O95832 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLDN1O95832 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN1O95832 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN1O95832 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN1O95832 KRT8P20-201ENST00000423953 1409 ntBASIC17.18■□□□□ 0.34
CLDN1O95832 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN1O95832 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN1O95832 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.18■□□□□ 0.34
CLDN1O95832 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLDN1O95832 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN1O95832 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN1O95832 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN1O95832 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN1O95832 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN1O95832 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN1O95832 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN1O95832 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN1O95832 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN1O95832 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLDN1O95832 AP000593.1-201ENST00000393668 712 ntBASIC17.17■□□□□ 0.34
CLDN1O95832 AL845331.1-201ENST00000424978 1190 ntBASIC17.17■□□□□ 0.34
CLDN1O95832 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.17■□□□□ 0.34
CLDN1O95832 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.17■□□□□ 0.34
CLDN1O95832 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN1O95832 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLDN1O95832 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.17■□□□□ 0.34
CLDN1O95832 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.17■□□□□ 0.34
CLDN1O95832 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN1O95832 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CLDN1O95832 AL023803.3-201ENST00000615559 522 ntBASIC17.17■□□□□ 0.34
CLDN1O95832 AC004263.2-201ENST00000617183 678 ntBASIC17.17■□□□□ 0.34
CLDN1O95832 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN1O95832 CR769767.2-201ENST00000622735 460 ntBASIC17.17■□□□□ 0.34
CLDN1O95832 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.17■□□□□ 0.34
CLDN1O95832 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN1O95832 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN1O95832 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CLDN1O95832 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN1O95832 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN1O95832 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CLDN1O95832 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CLDN1O95832 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN1O95832 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN1O95832 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms