Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1BO75841 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1BO75841 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1BO75841 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1BO75841 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1BO75841 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
UPK1BO75841 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
UPK1BO75841 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
UPK1BO75841 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1BO75841 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1BO75841 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.82■□□□□ 0.28
UPK1BO75841 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
UPK1BO75841 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
UPK1BO75841 SLC47A1P1-202ENST00000449666 945 ntBASIC16.82■□□□□ 0.28
UPK1BO75841 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.82■□□□□ 0.28
UPK1BO75841 PVT1-219ENST00000523427 938 ntTSL 3 BASIC16.82■□□□□ 0.28
UPK1BO75841 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.82■□□□□ 0.28
UPK1BO75841 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1BO75841 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.82■□□□□ 0.28
UPK1BO75841 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1BO75841 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.82■□□□□ 0.28
UPK1BO75841 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1BO75841 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC16.82■□□□□ 0.28
UPK1BO75841 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
UPK1BO75841 AC046158.3-201ENST00000624947 2558 ntBASIC16.82■□□□□ 0.28
UPK1BO75841 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1BO75841 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
UPK1BO75841 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1BO75841 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1BO75841 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
UPK1BO75841 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1BO75841 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1BO75841 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1BO75841 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1BO75841 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1BO75841 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC16.81■□□□□ 0.28
UPK1BO75841 YBX1P4-201ENST00000392794 808 ntBASIC16.81■□□□□ 0.28
UPK1BO75841 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.81■□□□□ 0.28
UPK1BO75841 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1BO75841 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1BO75841 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.81■□□□□ 0.28
UPK1BO75841 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.81■□□□□ 0.28
UPK1BO75841 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1BO75841 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1BO75841 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1BO75841 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1BO75841 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1BO75841 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1BO75841 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1BO75841 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1BO75841 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
UPK1BO75841 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.81■□□□□ 0.28
UPK1BO75841 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1BO75841 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1BO75841 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1BO75841 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
UPK1BO75841 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1BO75841 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1BO75841 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1BO75841 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1BO75841 IRX1P1-201ENST00000438849 1838 ntBASIC16.8■□□□□ 0.28
UPK1BO75841 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
UPK1BO75841 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1BO75841 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.8■□□□□ 0.28
UPK1BO75841 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1BO75841 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.8■□□□□ 0.28
UPK1BO75841 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC16.8■□□□□ 0.28
UPK1BO75841 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1BO75841 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1BO75841 ATP5G2P3-201ENST00000429083 425 ntBASIC16.8■□□□□ 0.28
UPK1BO75841 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1BO75841 AC008175.2-201ENST00000612840 297 ntBASIC16.8■□□□□ 0.28
UPK1BO75841 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
UPK1BO75841 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1BO75841 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
UPK1BO75841 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.8■□□□□ 0.28
UPK1BO75841 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1BO75841 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1BO75841 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1BO75841 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
UPK1BO75841 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.8■□□□□ 0.28
UPK1BO75841 AD000864.1-201ENST00000624076 2295 ntBASIC16.8■□□□□ 0.28
UPK1BO75841 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.8■□□□□ 0.28
UPK1BO75841 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1BO75841 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
UPK1BO75841 KRT16P6-202ENST00000425692 1426 ntBASIC16.79■□□□□ 0.28
UPK1BO75841 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK1BO75841 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK1BO75841 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK1BO75841 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
UPK1BO75841 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK1BO75841 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK1BO75841 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
UPK1BO75841 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK1BO75841 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK1BO75841 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.79■□□□□ 0.28
UPK1BO75841 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK1BO75841 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
UPK1BO75841 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.79■□□□□ 0.28
UPK1BO75841 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms