Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT3O75175 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.66■□□□□ 0.58
CNOT3O75175 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CNOT3O75175 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT3O75175 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT3O75175 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT3O75175 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT3O75175 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CNOT3O75175 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CNOT3O75175 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.65■□□□□ 0.58
CNOT3O75175 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT3O75175 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT3O75175 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.65■□□□□ 0.58
CNOT3O75175 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.65■□□□□ 0.58
CNOT3O75175 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT3O75175 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.65■□□□□ 0.58
CNOT3O75175 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CNOT3O75175 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT3O75175 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT3O75175 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT3O75175 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.65■□□□□ 0.58
CNOT3O75175 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.65■□□□□ 0.58
CNOT3O75175 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CNOT3O75175 AF186192.3-201ENST00000583427 947 ntBASIC18.65■□□□□ 0.58
CNOT3O75175 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC18.65■□□□□ 0.58
CNOT3O75175 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT3O75175 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT3O75175 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CNOT3O75175 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CNOT3O75175 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT3O75175 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT3O75175 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CNOT3O75175 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CNOT3O75175 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CNOT3O75175 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.65■□□□□ 0.58
CNOT3O75175 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CNOT3O75175 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CNOT3O75175 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.64■□□□□ 0.58
CNOT3O75175 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CNOT3O75175 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
CNOT3O75175 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CNOT3O75175 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CNOT3O75175 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT3O75175 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CNOT3O75175 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.64■□□□□ 0.57
CNOT3O75175 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT3O75175 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.64■□□□□ 0.57
CNOT3O75175 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT3O75175 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CNOT3O75175 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT3O75175 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.64■□□□□ 0.57
CNOT3O75175 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.64■□□□□ 0.57
CNOT3O75175 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT3O75175 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.64■□□□□ 0.57
CNOT3O75175 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.64■□□□□ 0.57
CNOT3O75175 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.64■□□□□ 0.57
CNOT3O75175 AP001412.1-201ENST00000608405 714 ntBASIC18.64■□□□□ 0.57
CNOT3O75175 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC18.64■□□□□ 0.57
CNOT3O75175 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.64■□□□□ 0.57
CNOT3O75175 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT3O75175 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.64■□□□□ 0.57
CNOT3O75175 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT3O75175 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT3O75175 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
CNOT3O75175 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT3O75175 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT3O75175 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT3O75175 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.64■□□□□ 0.57
CNOT3O75175 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CNOT3O75175 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT3O75175 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.63■□□□□ 0.57
CNOT3O75175 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.63■□□□□ 0.57
CNOT3O75175 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CNOT3O75175 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT3O75175 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.63■□□□□ 0.57
CNOT3O75175 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC18.63■□□□□ 0.57
CNOT3O75175 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT3O75175 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT3O75175 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT3O75175 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT3O75175 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT3O75175 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CNOT3O75175 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CNOT3O75175 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.62■□□□□ 0.57
CNOT3O75175 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT3O75175 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.62■□□□□ 0.57
CNOT3O75175 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.62■□□□□ 0.57
CNOT3O75175 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT3O75175 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT3O75175 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CNOT3O75175 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT3O75175 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CNOT3O75175 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT3O75175 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT3O75175 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CNOT3O75175 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.62■□□□□ 0.57
CNOT3O75175 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.62■□□□□ 0.57
CNOT3O75175 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.62■□□□□ 0.57
CNOT3O75175 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.62■□□□□ 0.57
CNOT3O75175 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms