Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 AC011676.5-201ENST00000624864 2660 ntBASIC17.28■□□□□ 0.36
PFDN1O60925 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PFDN1O60925 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PFDN1O60925 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PFDN1O60925 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PFDN1O60925 NKILA-202ENST00000614771 2598 ntBASIC17.28■□□□□ 0.36
PFDN1O60925 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.28■□□□□ 0.36
PFDN1O60925 AL031598.1-201ENST00000561511 1773 ntBASIC17.28■□□□□ 0.36
PFDN1O60925 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PFDN1O60925 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PFDN1O60925 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.27■□□□□ 0.36
PFDN1O60925 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PFDN1O60925 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PFDN1O60925 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.27■□□□□ 0.36
PFDN1O60925 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC17.27■□□□□ 0.36
PFDN1O60925 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PFDN1O60925 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.27■□□□□ 0.36
PFDN1O60925 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PFDN1O60925 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
PFDN1O60925 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PFDN1O60925 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.27■□□□□ 0.35
PFDN1O60925 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PFDN1O60925 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PFDN1O60925 GNAS-203ENST00000306120 1878 ntBASIC17.27■□□□□ 0.35
PFDN1O60925 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.26■□□□□ 0.35
PFDN1O60925 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.26■□□□□ 0.35
PFDN1O60925 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.26■□□□□ 0.35
PFDN1O60925 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.26■□□□□ 0.35
PFDN1O60925 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN1O60925 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN1O60925 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.26■□□□□ 0.35
PFDN1O60925 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PFDN1O60925 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.26■□□□□ 0.35
PFDN1O60925 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN1O60925 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.26■□□□□ 0.35
PFDN1O60925 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.26■□□□□ 0.35
PFDN1O60925 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
PFDN1O60925 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN1O60925 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN1O60925 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN1O60925 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PFDN1O60925 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
PFDN1O60925 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PFDN1O60925 DUX4L4-201ENST00000566884 1269 ntBASIC17.26■□□□□ 0.35
PFDN1O60925 AC063926.3-201ENST00000624734 5658 ntBASIC17.26■□□□□ 0.35
PFDN1O60925 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN1O60925 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN1O60925 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN1O60925 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN1O60925 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN1O60925 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN1O60925 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN1O60925 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN1O60925 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN1O60925 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC17.26■□□□□ 0.35
PFDN1O60925 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.26■□□□□ 0.35
PFDN1O60925 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PFDN1O60925 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PFDN1O60925 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN1O60925 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN1O60925 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN1O60925 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PFDN1O60925 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.25■□□□□ 0.35
PFDN1O60925 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN1O60925 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN1O60925 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PFDN1O60925 Z98044.1-201ENST00000632503 1764 ntBASIC17.25■□□□□ 0.35
PFDN1O60925 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC17.25■□□□□ 0.35
PFDN1O60925 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC17.25■□□□□ 0.35
PFDN1O60925 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN1O60925 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN1O60925 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
PFDN1O60925 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.25■□□□□ 0.35
PFDN1O60925 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.25■□□□□ 0.35
PFDN1O60925 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN1O60925 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PFDN1O60925 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN1O60925 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PFDN1O60925 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.25■□□□□ 0.35
PFDN1O60925 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.25■□□□□ 0.35
PFDN1O60925 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN1O60925 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PFDN1O60925 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
PFDN1O60925 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN1O60925 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN1O60925 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.25■□□□□ 0.35
PFDN1O60925 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN1O60925 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN1O60925 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN1O60925 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.25■□□□□ 0.35
PFDN1O60925 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.25■□□□□ 0.35
PFDN1O60925 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PFDN1O60925 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.25■□□□□ 0.35
PFDN1O60925 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PFDN1O60925 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PFDN1O60925 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PFDN1O60925 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PFDN1O60925 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PFDN1O60925 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
PFDN1O60925 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms