Protein–RNA interactions for Protein: O60662

KLHL41, Kelch-like protein 41, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL41O60662 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KLHL41O60662 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KLHL41O60662 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
KLHL41O60662 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.1■□□□□ 0.65
KLHL41O60662 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.1■□□□□ 0.65
KLHL41O60662 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KLHL41O60662 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
KLHL41O60662 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.09■□□□□ 0.65
KLHL41O60662 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
KLHL41O60662 KRT8P20-201ENST00000423953 1409 ntBASIC19.09■□□□□ 0.65
KLHL41O60662 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KLHL41O60662 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
KLHL41O60662 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
KLHL41O60662 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
KLHL41O60662 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.09■□□□□ 0.65
KLHL41O60662 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
KLHL41O60662 AC098590.1-201ENST00000468126 897 ntBASIC19.09■□□□□ 0.65
KLHL41O60662 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
KLHL41O60662 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.09■□□□□ 0.65
KLHL41O60662 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.09■□□□□ 0.65
KLHL41O60662 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KLHL41O60662 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KLHL41O60662 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
KLHL41O60662 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
KLHL41O60662 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KLHL41O60662 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KLHL41O60662 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
KLHL41O60662 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
KLHL41O60662 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
KLHL41O60662 KRT17P1-201ENST00000399211 1546 ntBASIC19.09■□□□□ 0.65
KLHL41O60662 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
KLHL41O60662 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.08■□□□□ 0.65
KLHL41O60662 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KLHL41O60662 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KLHL41O60662 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
KLHL41O60662 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
KLHL41O60662 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KLHL41O60662 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.08■□□□□ 0.64
KLHL41O60662 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
KLHL41O60662 RPS2P52-201ENST00000469610 820 ntBASIC19.08■□□□□ 0.64
KLHL41O60662 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.08■□□□□ 0.64
KLHL41O60662 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
KLHL41O60662 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KLHL41O60662 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
KLHL41O60662 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
KLHL41O60662 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
KLHL41O60662 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.08■□□□□ 0.64
KLHL41O60662 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
KLHL41O60662 CROCCP3-202ENST00000420820 1947 ntBASIC19.08■□□□□ 0.64
KLHL41O60662 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
KLHL41O60662 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHL41O60662 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHL41O60662 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHL41O60662 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KLHL41O60662 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.07■□□□□ 0.64
KLHL41O60662 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KLHL41O60662 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC19.07■□□□□ 0.64
KLHL41O60662 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHL41O60662 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
KLHL41O60662 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHL41O60662 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHL41O60662 MIR718-201ENST00000390190 70 ntBASIC19.07■□□□□ 0.64
KLHL41O60662 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.07■□□□□ 0.64
KLHL41O60662 AL355472.2-201ENST00000422958 438 ntBASIC19.07■□□□□ 0.64
KLHL41O60662 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KLHL41O60662 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.07■□□□□ 0.64
KLHL41O60662 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.07■□□□□ 0.64
KLHL41O60662 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHL41O60662 AC073648.6-201ENST00000641589 218 ntBASIC19.07■□□□□ 0.64
KLHL41O60662 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
KLHL41O60662 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHL41O60662 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.07■□□□□ 0.64
KLHL41O60662 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHL41O60662 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHL41O60662 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KLHL41O60662 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
KLHL41O60662 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
KLHL41O60662 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KLHL41O60662 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.06■□□□□ 0.64
KLHL41O60662 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KLHL41O60662 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
KLHL41O60662 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KLHL41O60662 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KLHL41O60662 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
KLHL41O60662 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KLHL41O60662 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KLHL41O60662 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KLHL41O60662 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KLHL41O60662 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
KLHL41O60662 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
KLHL41O60662 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KLHL41O60662 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
KLHL41O60662 RPS2P4-201ENST00000476944 856 ntBASIC19.06■□□□□ 0.64
KLHL41O60662 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KLHL41O60662 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
KLHL41O60662 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.06■□□□□ 0.64
KLHL41O60662 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KLHL41O60662 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
KLHL41O60662 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
KLHL41O60662 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms