Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.72■□□□□ 0.11
SSSCA1O60232 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SSSCA1O60232 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSSCA1O60232 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSSCA1O60232 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSSCA1O60232 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSSCA1O60232 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SSSCA1O60232 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSSCA1O60232 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSSCA1O60232 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.72■□□□□ 0.11
SSSCA1O60232 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SSSCA1O60232 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSSCA1O60232 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
SSSCA1O60232 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSSCA1O60232 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SSSCA1O60232 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSSCA1O60232 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC15.72■□□□□ 0.11
SSSCA1O60232 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.72■□□□□ 0.11
SSSCA1O60232 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSSCA1O60232 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
SSSCA1O60232 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSSCA1O60232 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.72■□□□□ 0.11
SSSCA1O60232 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SSSCA1O60232 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.72■□□□□ 0.11
SSSCA1O60232 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.72■□□□□ 0.11
SSSCA1O60232 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.71■□□□□ 0.11
SSSCA1O60232 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.71■□□□□ 0.11
SSSCA1O60232 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSSCA1O60232 FP475955.4-201ENST00000623131 1990 ntBASIC15.71■□□□□ 0.11
SSSCA1O60232 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSSCA1O60232 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSSCA1O60232 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC15.71■□□□□ 0.11
SSSCA1O60232 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSSCA1O60232 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SSSCA1O60232 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SSSCA1O60232 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.71■□□□□ 0.11
SSSCA1O60232 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSSCA1O60232 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SSSCA1O60232 SUDS3P1-201ENST00000505831 966 ntBASIC15.71■□□□□ 0.11
SSSCA1O60232 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SSSCA1O60232 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC15.71■□□□□ 0.11
SSSCA1O60232 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.71■□□□□ 0.11
SSSCA1O60232 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SSSCA1O60232 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SSSCA1O60232 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SSSCA1O60232 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
SSSCA1O60232 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SSSCA1O60232 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SSSCA1O60232 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SSSCA1O60232 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
SSSCA1O60232 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SSSCA1O60232 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.71■□□□□ 0.1
SSSCA1O60232 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC15.71■□□□□ 0.1
SSSCA1O60232 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SSSCA1O60232 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SSSCA1O60232 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSSCA1O60232 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.7■□□□□ 0.1
SSSCA1O60232 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.7■□□□□ 0.1
SSSCA1O60232 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSSCA1O60232 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSSCA1O60232 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.7■□□□□ 0.1
SSSCA1O60232 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
SSSCA1O60232 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.7■□□□□ 0.1
SSSCA1O60232 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSSCA1O60232 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSSCA1O60232 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSSCA1O60232 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSSCA1O60232 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SSSCA1O60232 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC15.7■□□□□ 0.1
SSSCA1O60232 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSSCA1O60232 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC15.7■□□□□ 0.1
SSSCA1O60232 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSSCA1O60232 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSSCA1O60232 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSSCA1O60232 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSSCA1O60232 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SSSCA1O60232 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSSCA1O60232 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSSCA1O60232 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSSCA1O60232 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SSSCA1O60232 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
SSSCA1O60232 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSSCA1O60232 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSSCA1O60232 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSSCA1O60232 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.7■□□□□ 0.1
SSSCA1O60232 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSSCA1O60232 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SSSCA1O60232 AL354751.1-201ENST00000412768 1863 ntBASIC15.69■□□□□ 0.1
SSSCA1O60232 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.69■□□□□ 0.1
SSSCA1O60232 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSSCA1O60232 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSSCA1O60232 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSSCA1O60232 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSSCA1O60232 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSSCA1O60232 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSSCA1O60232 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC15.69■□□□□ 0.1
SSSCA1O60232 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSSCA1O60232 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSSCA1O60232 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSSCA1O60232 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms