Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSX5O60225 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.5■□□□□ 0.23
SSX5O60225 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SSX5O60225 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SSX5O60225 AC141586.3-201ENST00000562166 1838 ntBASIC16.49■□□□□ 0.23
SSX5O60225 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SSX5O60225 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.49■□□□□ 0.23
SSX5O60225 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.49■□□□□ 0.23
SSX5O60225 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SSX5O60225 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.49■□□□□ 0.23
SSX5O60225 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
SSX5O60225 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
SSX5O60225 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
SSX5O60225 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 AC005332.8-201ENST00000622750 2735 ntBASIC16.49■□□□□ 0.23
SSX5O60225 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 BCL2-203ENST00000589955 5011 ntBASIC16.49■□□□□ 0.23
SSX5O60225 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.49■□□□□ 0.23
SSX5O60225 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.49■□□□□ 0.23
SSX5O60225 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SSX5O60225 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX5O60225 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX5O60225 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.48■□□□□ 0.23
SSX5O60225 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX5O60225 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SSX5O60225 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX5O60225 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX5O60225 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX5O60225 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SSX5O60225 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSX5O60225 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX5O60225 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX5O60225 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SSX5O60225 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.48■□□□□ 0.23
SSX5O60225 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX5O60225 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SSX5O60225 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX5O60225 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX5O60225 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX5O60225 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX5O60225 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSX5O60225 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.48■□□□□ 0.23
SSX5O60225 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSX5O60225 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.48■□□□□ 0.23
SSX5O60225 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.48■□□□□ 0.23
SSX5O60225 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX5O60225 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SSX5O60225 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SSX5O60225 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.48■□□□□ 0.23
SSX5O60225 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SSX5O60225 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.48■□□□□ 0.23
SSX5O60225 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.47■□□□□ 0.23
SSX5O60225 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.47■□□□□ 0.23
SSX5O60225 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
SSX5O60225 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.47■□□□□ 0.23
SSX5O60225 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SSX5O60225 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.47■□□□□ 0.23
SSX5O60225 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SSX5O60225 AL139384.1-201ENST00000612143 3047 ntBASIC16.47■□□□□ 0.23
SSX5O60225 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX5O60225 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX5O60225 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SSX5O60225 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX5O60225 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX5O60225 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.47■□□□□ 0.23
SSX5O60225 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.47■□□□□ 0.23
SSX5O60225 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.47■□□□□ 0.23
SSX5O60225 AC023632.3-201ENST00000521633 145 ntBASIC16.47■□□□□ 0.23
SSX5O60225 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SSX5O60225 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.47■□□□□ 0.23
SSX5O60225 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
SSX5O60225 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.47■□□□□ 0.23
SSX5O60225 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC16.47■□□□□ 0.23
SSX5O60225 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SSX5O60225 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX5O60225 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
SSX5O60225 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX5O60225 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SSX5O60225 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.47■□□□□ 0.23
SSX5O60225 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms