Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC24.57■■□□□ 1.52
ABCC4O15439 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC24.57■■□□□ 1.52
ABCC4O15439 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC24.57■■□□□ 1.52
ABCC4O15439 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
ABCC4O15439 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
ABCC4O15439 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
ABCC4O15439 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
ABCC4O15439 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
ABCC4O15439 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
ABCC4O15439 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC24.56■■□□□ 1.52
ABCC4O15439 TMA16-209ENST00000513272 803 ntTSL 2 BASIC24.56■■□□□ 1.52
ABCC4O15439 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC24.56■■□□□ 1.52
ABCC4O15439 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC24.56■■□□□ 1.52
ABCC4O15439 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC24.56■■□□□ 1.52
ABCC4O15439 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
ABCC4O15439 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
ABCC4O15439 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
ABCC4O15439 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC24.55■■□□□ 1.52
ABCC4O15439 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
ABCC4O15439 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC24.55■■□□□ 1.52
ABCC4O15439 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
ABCC4O15439 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC24.55■■□□□ 1.52
ABCC4O15439 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ABCC4O15439 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC24.55■■□□□ 1.52
ABCC4O15439 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
ABCC4O15439 PPP1R14BP5-201ENST00000440334 435 ntBASIC24.55■■□□□ 1.52
ABCC4O15439 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
ABCC4O15439 AL031985.4-201ENST00000642138 673 ntBASIC24.55■■□□□ 1.52
ABCC4O15439 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
ABCC4O15439 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC24.55■■□□□ 1.52
ABCC4O15439 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC24.55■■□□□ 1.52
ABCC4O15439 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC24.55■■□□□ 1.52
ABCC4O15439 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
ABCC4O15439 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC24.55■■□□□ 1.52
ABCC4O15439 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
ABCC4O15439 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC24.54■■□□□ 1.52
ABCC4O15439 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC24.54■■□□□ 1.52
ABCC4O15439 AL032819.2-201ENST00000624543 2162 ntBASIC24.54■■□□□ 1.52
ABCC4O15439 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ABCC4O15439 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
ABCC4O15439 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
ABCC4O15439 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ABCC4O15439 AL137013.1-201ENST00000432946 1228 ntBASIC24.54■■□□□ 1.52
ABCC4O15439 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
ABCC4O15439 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
ABCC4O15439 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC24.54■■□□□ 1.52
ABCC4O15439 CFL2-205ENST00000555765 632 ntTSL 2 BASIC24.54■■□□□ 1.52
ABCC4O15439 NME3-204ENST00000563498 920 ntTSL 2 BASIC24.54■■□□□ 1.52
ABCC4O15439 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC24.54■■□□□ 1.52
ABCC4O15439 AL445675.2-201ENST00000620291 557 ntBASIC24.54■■□□□ 1.52
ABCC4O15439 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
ABCC4O15439 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC24.53■■□□□ 1.52
ABCC4O15439 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC24.53■■□□□ 1.52
ABCC4O15439 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC24.53■■□□□ 1.52
ABCC4O15439 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ABCC4O15439 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC24.53■■□□□ 1.52
ABCC4O15439 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC24.53■■□□□ 1.52
ABCC4O15439 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC24.53■■□□□ 1.52
ABCC4O15439 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
ABCC4O15439 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC24.53■■□□□ 1.52
ABCC4O15439 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC24.53■■□□□ 1.52
ABCC4O15439 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
ABCC4O15439 AC026271.3-201ENST00000571884 352 ntBASIC24.53■■□□□ 1.52
ABCC4O15439 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC24.53■■□□□ 1.52
ABCC4O15439 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC24.52■■□□□ 1.52
ABCC4O15439 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ABCC4O15439 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC24.52■■□□□ 1.52
ABCC4O15439 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC24.52■■□□□ 1.52
ABCC4O15439 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
ABCC4O15439 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
ABCC4O15439 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ABCC4O15439 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC24.52■■□□□ 1.52
ABCC4O15439 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
ABCC4O15439 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC24.52■■□□□ 1.52
ABCC4O15439 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC24.52■■□□□ 1.52
ABCC4O15439 PRR31-201ENST00000371629 978 ntTSL 2 BASIC24.52■■□□□ 1.52
ABCC4O15439 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC24.52■■□□□ 1.52
ABCC4O15439 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC24.52■■□□□ 1.52
ABCC4O15439 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC24.52■■□□□ 1.52
ABCC4O15439 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC24.52■■□□□ 1.52
ABCC4O15439 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
ABCC4O15439 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
ABCC4O15439 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
ABCC4O15439 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
ABCC4O15439 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ABCC4O15439 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC24.51■■□□□ 1.51
ABCC4O15439 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ABCC4O15439 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
ABCC4O15439 B3GAT3P1-201ENST00000471720 806 ntBASIC24.51■■□□□ 1.51
ABCC4O15439 Z85996.1-201ENST00000494644 937 ntBASIC24.51■■□□□ 1.51
ABCC4O15439 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC24.51■■□□□ 1.51
ABCC4O15439 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
ABCC4O15439 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
ABCC4O15439 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC24.51■■□□□ 1.51
ABCC4O15439 TEX21P-204ENST00000641479 1693 ntBASIC24.51■■□□□ 1.51
ABCC4O15439 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ABCC4O15439 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
ABCC4O15439 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
ABCC4O15439 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
ABCC4O15439 FSCN1P1-201ENST00000568912 1481 ntBASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms