Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC27.29■■□□□ 1.96
VGFO15240 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
VGFO15240 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
VGFO15240 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
VGFO15240 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
VGFO15240 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
VGFO15240 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC27.28■■□□□ 1.96
VGFO15240 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
VGFO15240 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC27.28■■□□□ 1.96
VGFO15240 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC27.28■■□□□ 1.96
VGFO15240 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
VGFO15240 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC27.28■■□□□ 1.96
VGFO15240 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC27.28■■□□□ 1.96
VGFO15240 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
VGFO15240 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
VGFO15240 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
VGFO15240 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC27.28■■□□□ 1.96
VGFO15240 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC27.28■■□□□ 1.96
VGFO15240 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC27.28■■□□□ 1.96
VGFO15240 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC27.28■■□□□ 1.96
VGFO15240 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC27.28■■□□□ 1.96
VGFO15240 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
VGFO15240 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC27.28■■□□□ 1.96
VGFO15240 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
VGFO15240 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
VGFO15240 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
VGFO15240 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC27.28■■□□□ 1.96
VGFO15240 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
VGFO15240 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
VGFO15240 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
VGFO15240 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
VGFO15240 ZNF815P-204ENST00000434898 1737 ntBASIC27.27■■□□□ 1.96
VGFO15240 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC27.27■■□□□ 1.96
VGFO15240 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
VGFO15240 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
VGFO15240 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
VGFO15240 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
VGFO15240 TSPY23P-201ENST00000440136 739 ntBASIC27.27■■□□□ 1.96
VGFO15240 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC27.27■■□□□ 1.96
VGFO15240 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC27.27■■□□□ 1.96
VGFO15240 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC27.27■■□□□ 1.96
VGFO15240 NDUFV2-AS1-203ENST00000608008 779 ntBASIC27.27■■□□□ 1.96
VGFO15240 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
VGFO15240 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
VGFO15240 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
VGFO15240 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
VGFO15240 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
VGFO15240 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
VGFO15240 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.96
VGFO15240 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC27.26■■□□□ 1.95
VGFO15240 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
VGFO15240 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
VGFO15240 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
VGFO15240 TSPY21P-201ENST00000433481 731 ntBASIC27.26■■□□□ 1.95
VGFO15240 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC27.26■■□□□ 1.95
VGFO15240 SPDYE13P-201ENST00000445314 798 ntBASIC27.26■■□□□ 1.95
VGFO15240 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
VGFO15240 FGF14-AS2-201ENST00000606448 1074 ntBASIC27.26■■□□□ 1.95
VGFO15240 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC27.26■■□□□ 1.95
VGFO15240 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
VGFO15240 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
VGFO15240 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC27.26■■□□□ 1.95
VGFO15240 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC27.26■■□□□ 1.95
VGFO15240 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
VGFO15240 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC27.26■■□□□ 1.95
VGFO15240 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.95
VGFO15240 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
VGFO15240 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC27.25■■□□□ 1.95
VGFO15240 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
VGFO15240 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC27.25■■□□□ 1.95
VGFO15240 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
VGFO15240 AL450487.1-201ENST00000426799 995 ntBASIC27.25■■□□□ 1.95
VGFO15240 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC27.25■■□□□ 1.95
VGFO15240 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
VGFO15240 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC27.25■■□□□ 1.95
VGFO15240 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
VGFO15240 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
VGFO15240 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
VGFO15240 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
VGFO15240 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
VGFO15240 CNP-204ENST00000472031 1019 ntTSL 2 BASIC27.24■■□□□ 1.95
VGFO15240 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC27.24■■□□□ 1.95
VGFO15240 CLEC4GP1-201ENST00000596555 870 ntBASIC27.24■■□□□ 1.95
VGFO15240 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
VGFO15240 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC27.24■■□□□ 1.95
VGFO15240 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
VGFO15240 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
VGFO15240 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC27.24■■□□□ 1.95
VGFO15240 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
VGFO15240 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
VGFO15240 AC099778.1-201ENST00000568593 1911 ntBASIC27.24■■□□□ 1.95
VGFO15240 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
VGFO15240 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC27.23■■□□□ 1.95
VGFO15240 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC27.23■■□□□ 1.95
VGFO15240 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
VGFO15240 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
VGFO15240 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
VGFO15240 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
VGFO15240 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
VGFO15240 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms