Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.47■□□□□ 0.39
SMAD9O15198 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD9O15198 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD9O15198 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD9O15198 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD9O15198 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD9O15198 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD9O15198 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD9O15198 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.47■□□□□ 0.39
SMAD9O15198 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD9O15198 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
SMAD9O15198 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD9O15198 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.47■□□□□ 0.39
SMAD9O15198 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SMAD9O15198 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD9O15198 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD9O15198 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.47■□□□□ 0.39
SMAD9O15198 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD9O15198 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.47■□□□□ 0.39
SMAD9O15198 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SMAD9O15198 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD9O15198 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD9O15198 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD9O15198 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD9O15198 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD9O15198 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SMAD9O15198 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.47■□□□□ 0.39
SMAD9O15198 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD9O15198 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD9O15198 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SMAD9O15198 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD9O15198 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD9O15198 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD9O15198 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD9O15198 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD9O15198 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD9O15198 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD9O15198 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC17.46■□□□□ 0.39
SMAD9O15198 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.46■□□□□ 0.39
SMAD9O15198 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD9O15198 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD9O15198 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD9O15198 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.46■□□□□ 0.39
SMAD9O15198 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SMAD9O15198 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SMAD9O15198 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.46■□□□□ 0.39
SMAD9O15198 C1QL1P1-201ENST00000568105 661 ntBASIC17.46■□□□□ 0.39
SMAD9O15198 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
SMAD9O15198 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD9O15198 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.46■□□□□ 0.39
SMAD9O15198 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD9O15198 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD9O15198 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
SMAD9O15198 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SMAD9O15198 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.46■□□□□ 0.39
SMAD9O15198 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD9O15198 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SMAD9O15198 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.46■□□□□ 0.39
SMAD9O15198 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SMAD9O15198 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.46■□□□□ 0.38
SMAD9O15198 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.45■□□□□ 0.38
SMAD9O15198 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
SMAD9O15198 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD9O15198 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SMAD9O15198 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.45■□□□□ 0.38
SMAD9O15198 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD9O15198 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD9O15198 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.45■□□□□ 0.38
SMAD9O15198 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.45■□□□□ 0.38
SMAD9O15198 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SMAD9O15198 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD9O15198 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SMAD9O15198 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.45■□□□□ 0.38
SMAD9O15198 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.45■□□□□ 0.38
SMAD9O15198 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.45■□□□□ 0.38
SMAD9O15198 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.45■□□□□ 0.38
SMAD9O15198 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD9O15198 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD9O15198 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.45■□□□□ 0.38
SMAD9O15198 RARRES2P10-201ENST00000564312 460 ntBASIC17.45■□□□□ 0.38
SMAD9O15198 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.45■□□□□ 0.38
SMAD9O15198 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.45■□□□□ 0.38
SMAD9O15198 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC17.45■□□□□ 0.38
SMAD9O15198 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.45■□□□□ 0.38
SMAD9O15198 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD9O15198 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD9O15198 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD9O15198 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD9O15198 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SMAD9O15198 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD9O15198 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.45■□□□□ 0.38
SMAD9O15198 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.45■□□□□ 0.38
SMAD9O15198 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD9O15198 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SMAD9O15198 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SMAD9O15198 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SMAD9O15198 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.44■□□□□ 0.38
SMAD9O15198 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMAD9O15198 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.44■□□□□ 0.38
SMAD9O15198 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms