Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RTCAO00442 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTCAO00442 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTCAO00442 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.38■□□□□ 0.53
RTCAO00442 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTCAO00442 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTCAO00442 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.38■□□□□ 0.53
RTCAO00442 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTCAO00442 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTCAO00442 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTCAO00442 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.38■□□□□ 0.53
RTCAO00442 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC18.38■□□□□ 0.53
RTCAO00442 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.38■□□□□ 0.53
RTCAO00442 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.38■□□□□ 0.53
RTCAO00442 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTCAO00442 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTCAO00442 HTR7P1-201ENST00000538670 1336 ntBASIC18.38■□□□□ 0.53
RTCAO00442 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RTCAO00442 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RTCAO00442 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.38■□□□□ 0.53
RTCAO00442 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTCAO00442 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RTCAO00442 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RTCAO00442 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTCAO00442 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RTCAO00442 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RTCAO00442 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RTCAO00442 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.37■□□□□ 0.53
RTCAO00442 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTCAO00442 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.37■□□□□ 0.53
RTCAO00442 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.37■□□□□ 0.53
RTCAO00442 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTCAO00442 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTCAO00442 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTCAO00442 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.37■□□□□ 0.53
RTCAO00442 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.37■□□□□ 0.53
RTCAO00442 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTCAO00442 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTCAO00442 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTCAO00442 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC18.37■□□□□ 0.53
RTCAO00442 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC18.37■□□□□ 0.53
RTCAO00442 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.37■□□□□ 0.53
RTCAO00442 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.37■□□□□ 0.53
RTCAO00442 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.37■□□□□ 0.53
RTCAO00442 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTCAO00442 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.37■□□□□ 0.53
RTCAO00442 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTCAO00442 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTCAO00442 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTCAO00442 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RTCAO00442 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.37■□□□□ 0.53
RTCAO00442 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RTCAO00442 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTCAO00442 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTCAO00442 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTCAO00442 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTCAO00442 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
RTCAO00442 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
RTCAO00442 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTCAO00442 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.36■□□□□ 0.53
RTCAO00442 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.36■□□□□ 0.53
RTCAO00442 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTCAO00442 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.36■□□□□ 0.53
RTCAO00442 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTCAO00442 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTCAO00442 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.36■□□□□ 0.53
RTCAO00442 GCSHP5-201ENST00000443090 522 ntBASIC18.36■□□□□ 0.53
RTCAO00442 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RTCAO00442 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.36■□□□□ 0.53
RTCAO00442 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.36■□□□□ 0.53
RTCAO00442 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.36■□□□□ 0.53
RTCAO00442 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
RTCAO00442 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.36■□□□□ 0.53
RTCAO00442 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTCAO00442 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RTCAO00442 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
RTCAO00442 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
RTCAO00442 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.35■□□□□ 0.53
RTCAO00442 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.35■□□□□ 0.53
RTCAO00442 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
RTCAO00442 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.35■□□□□ 0.53
RTCAO00442 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
RTCAO00442 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
RTCAO00442 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.35■□□□□ 0.53
RTCAO00442 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.35■□□□□ 0.53
RTCAO00442 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms