Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 NAPSB-206ENST00000562112 1266 ntBASIC21.71■■□□□ 1.07
DDX39AO00148 AC010947.1-201ENST00000623454 693 ntBASIC21.71■■□□□ 1.07
DDX39AO00148 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.71■■□□□ 1.07
DDX39AO00148 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX39AO00148 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.71■■□□□ 1.07
DDX39AO00148 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.71■■□□□ 1.07
DDX39AO00148 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX39AO00148 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.71■■□□□ 1.07
DDX39AO00148 AC104417.2-201ENST00000562989 1793 ntBASIC21.71■■□□□ 1.07
DDX39AO00148 TREX1-205ENST00000625293 1783 ntBASIC21.71■■□□□ 1.07
DDX39AO00148 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
DDX39AO00148 KRT8P41-201ENST00000533985 1514 ntBASIC21.7■■□□□ 1.07
DDX39AO00148 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX39AO00148 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX39AO00148 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
DDX39AO00148 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX39AO00148 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.7■■□□□ 1.06
DDX39AO00148 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.7■■□□□ 1.06
DDX39AO00148 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX39AO00148 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX39AO00148 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
DDX39AO00148 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX39AO00148 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
DDX39AO00148 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX39AO00148 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX39AO00148 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX39AO00148 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX39AO00148 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.69■■□□□ 1.06
DDX39AO00148 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.69■■□□□ 1.06
DDX39AO00148 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX39AO00148 SDHAP1-207ENST00000440850 2000 ntBASIC21.69■■□□□ 1.06
DDX39AO00148 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.69■■□□□ 1.06
DDX39AO00148 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX39AO00148 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.69■■□□□ 1.06
DDX39AO00148 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.69■■□□□ 1.06
DDX39AO00148 MFAP1P1-201ENST00000442257 1255 ntBASIC21.69■■□□□ 1.06
DDX39AO00148 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.69■■□□□ 1.06
DDX39AO00148 KRT18P21-201ENST00000515767 1272 ntBASIC21.69■■□□□ 1.06
DDX39AO00148 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.69■■□□□ 1.06
DDX39AO00148 AC012306.2-201ENST00000609350 630 ntBASIC21.69■■□□□ 1.06
DDX39AO00148 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
DDX39AO00148 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.69■■□□□ 1.06
DDX39AO00148 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC21.69■■□□□ 1.06
DDX39AO00148 AC097493.4-201ENST00000641197 219 ntBASIC21.69■■□□□ 1.06
DDX39AO00148 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
DDX39AO00148 LINC01568-207ENST00000641790 1380 ntBASIC21.69■■□□□ 1.06
DDX39AO00148 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.69■■□□□ 1.06
DDX39AO00148 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
DDX39AO00148 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.69■■□□□ 1.06
DDX39AO00148 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
DDX39AO00148 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
DDX39AO00148 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
DDX39AO00148 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
DDX39AO00148 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
DDX39AO00148 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX39AO00148 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.68■■□□□ 1.06
DDX39AO00148 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX39AO00148 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX39AO00148 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.68■■□□□ 1.06
DDX39AO00148 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.68■■□□□ 1.06
DDX39AO00148 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.68■■□□□ 1.06
DDX39AO00148 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
DDX39AO00148 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX39AO00148 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX39AO00148 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
DDX39AO00148 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.68■■□□□ 1.06
DDX39AO00148 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX39AO00148 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.68■■□□□ 1.06
DDX39AO00148 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC21.68■■□□□ 1.06
DDX39AO00148 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX39AO00148 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
DDX39AO00148 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX39AO00148 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX39AO00148 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX39AO00148 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.67■■□□□ 1.06
DDX39AO00148 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX39AO00148 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX39AO00148 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.67■■□□□ 1.06
DDX39AO00148 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
DDX39AO00148 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX39AO00148 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX39AO00148 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC21.67■■□□□ 1.06
DDX39AO00148 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX39AO00148 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX39AO00148 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC21.67■■□□□ 1.06
DDX39AO00148 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC21.67■■□□□ 1.06
DDX39AO00148 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX39AO00148 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX39AO00148 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
DDX39AO00148 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX39AO00148 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX39AO00148 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX39AO00148 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX39AO00148 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.66■■□□□ 1.06
DDX39AO00148 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
DDX39AO00148 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
DDX39AO00148 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
DDX39AO00148 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21.66■■□□□ 1.06
DDX39AO00148 AP005242.2-201ENST00000580065 1175 ntBASIC21.66■■□□□ 1.06
DDX39AO00148 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms