Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COLCA2A8K830 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
COLCA2A8K830 PCDHB19P-201ENST00000570871 2371 ntBASIC14.87□□□□□ -0.03
COLCA2A8K830 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.87□□□□□ -0.03
COLCA2A8K830 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
COLCA2A8K830 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.86□□□□□ -0.03
COLCA2A8K830 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC14.86□□□□□ -0.03
COLCA2A8K830 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.86□□□□□ -0.03
COLCA2A8K830 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
COLCA2A8K830 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
COLCA2A8K830 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 LINC00554-201ENST00000564841 3011 ntBASIC14.86□□□□□ -0.03
COLCA2A8K830 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
COLCA2A8K830 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
COLCA2A8K830 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.86□□□□□ -0.03
COLCA2A8K830 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COLCA2A8K830 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COLCA2A8K830 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COLCA2A8K830 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC14.85□□□□□ -0.03
COLCA2A8K830 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COLCA2A8K830 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
COLCA2A8K830 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC14.85□□□□□ -0.03
COLCA2A8K830 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
COLCA2A8K830 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
COLCA2A8K830 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
COLCA2A8K830 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COLCA2A8K830 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COLCA2A8K830 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COLCA2A8K830 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC14.85□□□□□ -0.03
COLCA2A8K830 AL451085.2-201ENST00000605085 799 ntBASIC14.85□□□□□ -0.03
COLCA2A8K830 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC14.85□□□□□ -0.03
COLCA2A8K830 AC022413.1-201ENST00000624602 984 ntBASIC14.85□□□□□ -0.03
COLCA2A8K830 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COLCA2A8K830 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COLCA2A8K830 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COLCA2A8K830 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COLCA2A8K830 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COLCA2A8K830 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC14.85□□□□□ -0.03
COLCA2A8K830 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.85□□□□□ -0.03
COLCA2A8K830 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COLCA2A8K830 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COLCA2A8K830 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COLCA2A8K830 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
COLCA2A8K830 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
COLCA2A8K830 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.85□□□□□ -0.03
COLCA2A8K830 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.85□□□□□ -0.03
COLCA2A8K830 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.84□□□□□ -0.03
COLCA2A8K830 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
COLCA2A8K830 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COLCA2A8K830 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COLCA2A8K830 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COLCA2A8K830 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COLCA2A8K830 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
COLCA2A8K830 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
COLCA2A8K830 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COLCA2A8K830 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COLCA2A8K830 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COLCA2A8K830 ABR-203ENST00000536794 2213 ntTSL 2 BASIC14.84□□□□□ -0.03
COLCA2A8K830 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COLCA2A8K830 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
COLCA2A8K830 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COLCA2A8K830 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
COLCA2A8K830 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
COLCA2A8K830 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC14.84□□□□□ -0.03
COLCA2A8K830 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC14.84□□□□□ -0.03
COLCA2A8K830 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COLCA2A8K830 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
COLCA2A8K830 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
COLCA2A8K830 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COLCA2A8K830 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COLCA2A8K830 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COLCA2A8K830 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COLCA2A8K830 PCDHA1-201ENST00000378133 2726 ntBASIC14.84□□□□□ -0.03
COLCA2A8K830 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
COLCA2A8K830 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
COLCA2A8K830 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
COLCA2A8K830 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
COLCA2A8K830 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms