Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC13.71□□□□□ -0.22
LINC01549A6NIU2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01549A6NIU2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC13.71□□□□□ -0.22
LINC01549A6NIU2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
LINC01549A6NIU2 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01549A6NIU2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
LINC01549A6NIU2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 NFIC-211ENST00000641145 8399 ntBASIC13.7□□□□□ -0.22
LINC01549A6NIU2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC01549A6NIU2 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 MIR4466-201ENST00000606121 54 ntBASIC13.69□□□□□ -0.22
LINC01549A6NIU2 FGF8-207ENST00000618991 856 ntTSL 3 BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 AL162741.1-201ENST00000565563 1558 ntBASIC13.69□□□□□ -0.22
LINC01549A6NIU2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC01549A6NIU2 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 RARRES2P1-201ENST00000474487 481 ntBASIC13.68□□□□□ -0.22
LINC01549A6NIU2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC01549A6NIU2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms